Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu4799 and Atu4800 are separated by 4 nucleotidesAtu4800 and Atu4801 are separated by 13 nucleotidesAtu4801 and Atu4802 are separated by 117 nucleotidesAtu4802 and Atu4803 are separated by 215 nucleotides Atu4799: Atu4799 - dTDP-4-dehydrorhamnose 3,5-epimerase, at 1,974,870 to 1,975,397 Atu4799 Atu4800: Atu4800 - hypothetical protein, at 1,975,402 to 1,976,745 Atu4800 Atu4801: Atu4801 - NAD-dependent epimerase/dehydratase, at 1,976,759 to 1,977,829 Atu4801 Atu4802: Atu4802 - glutamate-1-semialdehyde 2,1-aminomutase, at 1,977,947 to 1,979,350 Atu4802 Atu4803: Atu4803 - two component response regulator, at 1,979,566 to 1,980,294 Atu4803
Group Condition Atu4799 Atu4800 Atu4801 Atu4802 Atu4803
stress R2A with G418 disolution 0.02 mM -0.4 -0.4 -0.1 -0.2 -0.6
stress R2A with Sisomicin 0.001 mM -0.4 -0.4 -0.2 -0.2 -0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.3 -0.2 +0.3 -0.2 -0.8
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.4 -0.1 +0.3 +0.1 -0.7
nitrogen source DL-2-Aminobutyric (N) -0.7 -0.2 +0.1 -0.4 +0.3
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.3 +0.0 -0.7 -0.1 +1.0
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.7 -0.2 +0.2 -0.1 +1.0
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.5 -0.0 +0.5 -0.2 +0.8
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.5 +0.5 +0.3 +0.2 -0.2
phage AgroPhage_E10 +0.8 +0.3 +0.3 -0.3 +0.2
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +1.2 +0.0 +0.3 +0.4 -0.3
lb_sorghum_leaf LB_sorghum_leaf +0.3 +0.2 +0.4 +0.4 +0.2
lb_sorghum_leaf LB_sorghum_leaf +0.4 +0.2 +0.6 +0.5 +0.0
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 +0.3 +0.8 +0.1 +0.3
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.5 +0.3 +0.4 +0.2 +0.2
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days +0.4 +0.2 +0.5 +0.4 +0.3
lb_tomato_root LB_Tomato_root +0.2 +0.4 +0.4 +0.2 +0.4
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.7 +0.1 +0.4 +0.2 +0.4
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days +0.2 +0.2 +0.4 +0.4 +0.6
lb_arabidopsis_leaf LB_arabidopsis_leaf +0.4 +0.3 +0.6 +0.3 +0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.3 +0.3 +0.8 +0.6 -0.2
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.9 +0.1 +0.4 +0.7 -0.1
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 +0.2 +0.6 +0.3 +0.6
stress Pyrogallol 0.5 mM +0.2 +0.4 +0.3 +0.5 +0.5
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 +0.1 +0.4 +0.4 +0.9
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.5 +0.5 +0.5 +0.4 +0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.4 +0.3 +0.8 +0.5 +0.6
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.6 +0.3 +0.8 +0.8 +0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.7 +0.5 +0.6 +0.5 +0.4
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.5 +0.2 +0.5 +0.5 +1.0
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