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Protein
Homologs
Fitness for 5 genes in
Agrobacterium fabrum C58
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500 nt
Atu4799 and Atu4800 are separated by 4 nucleotides
Atu4800 and Atu4801 are separated by 13 nucleotides
Atu4801 and Atu4802 are separated by 117 nucleotides
Atu4802 and Atu4803 are separated by 215 nucleotides
Atu4799: Atu4799 - dTDP-4-dehydrorhamnose 3,5-epimerase, at 1,974,870 to 1,975,397
Atu4799
Atu4800: Atu4800 - hypothetical protein, at 1,975,402 to 1,976,745
Atu4800
Atu4801: Atu4801 - NAD-dependent epimerase/dehydratase, at 1,976,759 to 1,977,829
Atu4801
Atu4802: Atu4802 - glutamate-1-semialdehyde 2,1-aminomutase, at 1,977,947 to 1,979,350
Atu4802
Atu4803: Atu4803 - two component response regulator, at 1,979,566 to 1,980,294
Atu4803
Group
Condition
Atu4799
Atu4800
Atu4801
Atu4802
Atu4803
stress
R2A with G418 disolution 0.02 mM
-0.4
-0.4
-0.1
-0.2
-0.6
stress
R2A with Sisomicin 0.001 mM
-0.4
-0.4
-0.2
-0.2
-0.4
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.3
-0.2
+0.3
-0.2
-0.8
in planta
Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
-0.4
-0.1
+0.3
+0.1
-0.7
nitrogen source
DL-2-Aminobutyric (N)
-0.7
-0.2
+0.1
-0.4
+0.3
in planta
Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
-0.3
+0.0
-0.7
-0.1
+1.0
in planta
Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
-0.7
-0.2
+0.2
-0.1
+1.0
in planta
Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
-0.5
-0.0
+0.5
-0.2
+0.8
in planta
Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
+0.5
+0.5
+0.3
+0.2
-0.2
phage
AgroPhage_E10
+0.8
+0.3
+0.3
-0.3
+0.2
in planta
Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
+1.2
+0.0
+0.3
+0.4
-0.3
lb_sorghum_leaf
LB_sorghum_leaf
+0.3
+0.2
+0.4
+0.4
+0.2
lb_sorghum_leaf
LB_sorghum_leaf
+0.4
+0.2
+0.6
+0.5
+0.0
in planta
Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.2
+0.3
+0.8
+0.1
+0.3
in planta
Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.5
+0.3
+0.4
+0.2
+0.2
in planta
Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days
+0.4
+0.2
+0.5
+0.4
+0.3
lb_tomato_root
LB_Tomato_root
+0.2
+0.4
+0.4
+0.2
+0.4
in planta
Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.7
+0.1
+0.4
+0.2
+0.4
in planta
Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days
+0.2
+0.2
+0.4
+0.4
+0.6
lb_arabidopsis_leaf
LB_arabidopsis_leaf
+0.4
+0.3
+0.6
+0.3
+0.2
in planta
Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
+0.3
+0.3
+0.8
+0.6
-0.2
in planta
Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.9
+0.1
+0.4
+0.7
-0.1
in planta
Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.3
+0.2
+0.6
+0.3
+0.6
stress
Pyrogallol 0.5 mM
+0.2
+0.4
+0.3
+0.5
+0.5
in planta
Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.3
+0.1
+0.4
+0.4
+0.9
in planta
Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
+0.5
+0.5
+0.5
+0.4
+0.2
in planta
Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
+0.4
+0.3
+0.8
+0.5
+0.6
in planta
Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
+0.6
+0.3
+0.8
+0.8
+0.2
in planta
Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
+0.7
+0.5
+0.6
+0.5
+0.4
in planta
Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
+0.5
+0.2
+0.5
+0.5
+1.0
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