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Protein
Homologs
Fitness for 5 genes in
Agrobacterium fabrum C58
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500 nt
Atu4787 and Atu4788 are separated by 136 nucleotides
Atu4788 and Atu4789 are separated by 316 nucleotides
Atu4789 and Atu4790 are separated by 10 nucleotides
Atu4790 and Atu8097 overlap by 4 nucleotides
Atu4787: Atu4787 - inositol monophosphatase, at 1,959,613 to 1,960,422
Atu4787
Atu4788: Atu4788 - hypothetical protein, at 1,960,559 to 1,961,638
Atu4788
Atu4789: Atu4789 - GDP-mannose 4,6-dehydratase, at 1,961,955 to 1,963,025
Atu4789
Atu4790: Atu4790 - GDP-fucose synthetase, at 1,963,036 to 1,964,004
Atu4790
Atu8097: Atu8097 - hypothetical protein, at 1,964,001 to 1,965,950
Atu8097
Group
Condition
Atu4787
Atu4788
Atu4789
Atu4790
Atu8097
in planta
Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
-1.2
+0.0
+0.2
+0.0
+0.2
in planta
Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
-0.6
+0.3
+0.1
-0.3
-0.0
Atjh14
+0.2
+0.2
+0.0
-0.7
-0.2
nitrogen source
DL-2-Aminobutyric (N)
+0.8
-0.6
-0.4
+0.0
-0.3
in planta
Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.0
+0.5
+0.0
-0.8
+0.2
in planta
Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
-0.1
+0.0
+0.7
-0.3
+0.3
in planta
Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
+0.5
-0.3
+0.5
+0.0
+0.2
in planta
Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.9
-0.3
+0.0
+0.1
+0.1
in planta
Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+1.0
+0.1
-0.0
+0.2
-0.2
in planta
Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+1.0
-0.2
+0.2
+0.1
+0.1
in planta
Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
-0.1
+0.4
+0.4
+0.3
+0.3
lb
LB
+0.3
+0.1
+0.4
+0.3
+0.3
in planta
Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
-0.0
+0.5
+0.3
+0.3
+0.3
in planta
Plant=Arabidopsis_efr; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days
+0.2
+0.3
+0.2
+0.4
+0.3
in planta
Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.8
+0.3
+0.4
-0.2
+0.0
in planta
Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.6
+0.4
-0.0
+0.3
+0.2
nophagecontrol
No phage control
+0.5
+0.3
+0.4
+0.1
+0.2
carbon source
L-(+)-Erythrulose (C)
+0.2
+0.4
+0.3
+0.4
+0.3
lb_sorghum_leaf
LB_sorghum_leaf
+0.5
+0.3
+0.2
+0.3
+0.3
lb_arabidopsis_leaf
LB_arabidopsis_leaf
+0.2
+0.3
+0.3
+0.3
+0.4
lb_arabidopsis_leaf
LB_arabidopsis_leaf
+0.4
+0.2
+0.2
+0.3
+0.4
lb_sorghum_leaf
LB_sorghum_leaf
+0.2
+0.2
+0.3
+0.5
+0.4
in planta
Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
+0.6
+0.1
+0.3
+0.2
+0.4
lb_arabidopsis_leaf
LB_arabidopsis_leaf
+0.4
+0.3
+0.3
+0.3
+0.3
in planta
Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
+0.1
+0.6
+0.3
+0.4
+0.3
in planta
Plant=Arabidopsis_col0; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days
+0.3
+0.3
+0.3
+0.5
+0.3
stress
Pyrogallol 0.5 mM
+0.5
+0.3
+0.3
+0.3
+0.4
in planta
Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
+0.3
+0.4
+0.5
+0.4
+0.4
in planta
Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
+0.6
+0.5
+0.5
+0.3
+0.4
in planta
Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
+0.8
+0.5
+0.4
+0.2
+0.5
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