Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu4756 and Atu4757 are separated by 3 nucleotidesAtu4757 and Atu4758 overlap by 4 nucleotidesAtu4758 and Atu4759 overlap by 4 nucleotidesAtu4759 and Atu4760 are separated by 91 nucleotides Atu4756: Atu4756 - hypothetical protein, at 1,924,573 to 1,925,586 Atu4756 Atu4757: Atu4757 - Xaa-Pro dipeptidase, at 1,925,590 to 1,926,768 Atu4757 Atu4758: Atu4758 - ectoine utilization protein EutC, at 1,926,765 to 1,927,778 Atu4758 Atu4759: Atu4759 - threonine dehydratase, at 1,927,775 to 1,928,770 Atu4759 Atu4760: Atu4760 - GntR family transcriptional regulator, at 1,928,862 to 1,930,310 Atu4760
Group Condition Atu4756 Atu4757 Atu4758 Atu4759 Atu4760
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.3 -1.2 +0.2 -0.1 -0.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.3 -0.5 -0.2 -0.5 -0.2
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 -1.1 -0.1 +0.0 -0.2
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.2 -0.3 -0.3 +0.1 -0.6
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.3 -0.2 -0.3 +0.3 -0.9
carbon source Propan-1-ol (C) -0.1 -0.6 -0.4 -0.0 -0.2
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.5 +0.1 -0.5 +0.2 -0.5
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.0 -0.6 +0.3 +0.0 -0.6
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.5 -0.5 +0.2 +0.6 -0.7
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.2 -0.3 -0.5 +0.1 -0.2
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.3 -0.0 +0.4 -0.3 -0.5
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.0 -0.3 +0.3 -0.2 -0.5
nitrogen source DL-2-Aminobutyric (N) +0.3 -0.4 +0.1 -0.3 -0.3
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.0 -0.6 +0.3 +0.3 -0.5
phage AgroPhage_D10 -0.7 +0.5 -0.0 +0.1 -0.4
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.7 +0.3 +0.4 -0.4 +0.0
lb LB -0.6 +0.5 -0.2 +0.1 -0.0
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.6 +0.6 +0.2 +0.0 -0.4
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.0 -0.1 -0.1 +0.6 -0.5
lb_sorghum btx 430 LB_Sorghum Btx 430 -0.4 +0.4 +0.2 +0.1 -0.2
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.3 +0.3 -0.4 +0.1 -0.3
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.5 +0.4 +0.4 +0.1 -0.2
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.6 +0.6 +0.0 +0.1 +0.1
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days -0.5 +0.6 +0.0 +0.3 +0.0
phage AgroPhage_E04 -0.4 +0.2 +0.3 +0.3 +0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.5 +1.0 +0.0 -0.1 +0.3
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -0.4 +0.8 +0.1 +0.2 +0.1
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.2 +0.9 +0.1 -0.2 -0.1
stress R2A with m-arsenite 0.8 mM +0.3 +0.2 -0.2 +0.5 +0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.3 +0.3 +0.3 +0.4 +0.1
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