Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu4753 and Atu4754 are separated by 12 nucleotidesAtu4754 and Atu4755 are separated by 60 nucleotidesAtu4755 and Atu4756 are separated by 60 nucleotidesAtu4756 and Atu4757 are separated by 3 nucleotides Atu4753: Atu4753 - amino acid ABC transporter permease, at 1,922,230 to 1,922,922 Atu4753 Atu4754: Atu4754 - amino acid ABC transporter permease, at 1,922,935 to 1,923,600 Atu4754 Atu4755: Atu4755 - amino acid ABC transporter substrate-binding protein, at 1,923,661 to 1,924,512 Atu4755 Atu4756: Atu4756 - hypothetical protein, at 1,924,573 to 1,925,586 Atu4756 Atu4757: Atu4757 - Xaa-Pro dipeptidase, at 1,925,590 to 1,926,768 Atu4757
Group Condition Atu4753 Atu4754 Atu4755 Atu4756 Atu4757
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -1.2 +0.2 -0.1 -0.1 -1.1
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -1.3 +0.3 -0.3 -0.2 -0.3
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -1.1 -0.0 +0.2 -0.4 -0.1
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -1.0 +0.2 -0.1 -0.3 -0.2
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 -0.0 +0.5 -0.3 -1.2
phage AgroPhage_C04 -0.2 -0.5 -0.4 -0.2 +0.3
phage AgroPhage_E04 -0.7 +0.2 -0.1 -0.4 +0.2
phage AgroPhage_D04 -0.6 -0.1 +0.4 -0.5 +0.2
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.5 +0.4 +0.2 +0.0 -0.6
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.3 -0.6 -0.1 -0.5 +1.0
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.7 +0.0 -0.1 -0.5 -0.5
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.5 +0.3 +0.2 -0.7 +0.3
phage AgroPhage_D10 +0.3 -0.2 -0.1 -0.6 +0.5
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.4 -0.2 +0.5 -0.6 +0.6
stress Chloramphenicol 12.5 ug/mL +0.6 +0.1 -0.0 +0.1 -0.7
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.3 +0.0 -0.3 -0.6 +0.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.6 +0.4 -0.2 -0.2 -0.3
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.6 +0.3 +0.1 -0.0 -0.6
lb LB +0.4 +0.2 +0.0 -0.6 +0.5
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days +0.7 +0.0 -0.1 -0.4 +0.3
stress Streptomycin 200 ug/mL -0.5 +0.0 +0.0 +0.8 +0.2
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days +0.3 +0.1 +0.2 -0.5 +0.6
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.7 +0.2 -0.0 +0.2 +0.9
phage AgroPhage_H04 +0.5 +0.0 +0.5 -0.5 +0.1
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days +0.5 +0.1 +0.1 -0.3 +0.5
phage AgroPhage_C10 +1.1 -0.4 +0.3 -0.4 +0.3
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days +0.6 +0.1 +0.1 -0.4 +0.8
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.9 +0.2 +0.3 -0.5 +0.4
Atjh14 +1.2 +0.1 +0.5 -0.1 -0.0
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +2.3 +0.6 -0.2 +0.0 +0.0
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