Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu4745 and Atu4746 overlap by 8 nucleotidesAtu4746 and Atu4747 overlap by 4 nucleotidesAtu4747 and Atu4748 are separated by 1 nucleotidesAtu4748 and Atu4749 are separated by 37 nucleotides Atu4745: Atu4745 - sugar ABC transporter ATPase, at 1,914,301 to 1,915,791 Atu4745 Atu4746: Atu4746 - sugar ABC transporter permease, at 1,915,784 to 1,916,800 Atu4746 Atu4747: Atu4747 - sugar ABC transporter permease, at 1,916,797 to 1,917,792 Atu4747 Atu4748: Atu4748 - D-tagatose 3-epimerase, at 1,917,794 to 1,918,645 Atu4748 Atu4749: Atu4749 - fructose transport system kinase, at 1,918,683 to 1,919,345 Atu4749
Group Condition Atu4745 Atu4746 Atu4747 Atu4748 Atu4749
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -0.2 +0.0 -0.4 -0.1 -1.0
phage AgroPhage_C10 -0.5 -0.5 -0.4 +0.2 -0.3
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 -0.3 -0.6 -0.6 +0.1
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 -0.3 -0.2 +0.0 -1.0
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.1 -0.0 -0.6 -0.6 -0.1
phage AgroPhage_C04 +0.2 -0.2 -0.7 +0.1 -0.7
phage AgroPhage_E10 +0.2 -0.5 +0.2 -0.0 -1.2
phage AgroPhage_F04 +0.2 -0.0 -0.2 -0.2 -1.0
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.4 +0.1 -0.2 +0.1 -0.8
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.0 -0.4 +0.2 -0.3 -0.7
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.1 +0.1 +0.2 -0.0 -1.3
in planta Bethi_Library_OD0.5 +0.1 -0.1 +0.2 -0.5 -0.8
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 +0.3 -0.5 -0.6 -0.1
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.1 +0.4 -0.5 -0.3 -0.4
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -0.2 -0.1 -0.3 +0.4 -0.5
nitrogen source DL-2-Aminobutyric (N) +0.8 -0.3 -0.1 -0.7 -0.3
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.4 +0.2 +0.1 -1.0 -0.3
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.5 -0.3 +0.2 +0.5 -0.3
stress Chloramphenicol 12.5 ug/mL +0.4 +0.0 -0.9 -0.1 +0.1
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 +0.3 -0.2 -0.6 -0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD2.0 +0.2 +0.3 -0.2 +0.3 -0.5
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.3 -0.2 +0.3 +0.3 -0.5
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.2 +0.4 +0.8 -0.5 -0.2
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.2 +0.4 +1.0 -0.0 -0.6
Atjh15 +0.2 +0.4 +0.3 +0.4 -0.4
Atjh10 +0.3 +0.1 +0.5 +0.3 -0.3
Atjh10 +0.4 -0.1 +0.6 +0.4 -0.0
Atjh15 +0.3 +0.2 +0.7 +0.5 -0.2
stress R2A with m-arsenite 0.8 mM +0.3 +0.3 -0.2 +0.3 +0.8
Atjh14 +0.5 +0.2 +0.9 +1.0 -0.0
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