Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu4736 and Atu4737 are separated by 198 nucleotidesAtu4737 and Atu4738 are separated by 204 nucleotidesAtu4738 and Atu4739 are separated by 53 nucleotidesAtu4739 and Atu4740 are separated by 112 nucleotides Atu4736: Atu4736 - methyl-accepting chemotaxis protein, at 1,903,103 to 1,905,046 Atu4736 Atu4737: Atu4737 - hypothetical protein, at 1,905,245 to 1,905,427 Atu4737 Atu4738: Atu4738 - chloramphenicol acetyltransferase, at 1,905,632 to 1,906,261 Atu4738 Atu4739: Atu4739 - flavin-containing monooxygenase, at 1,906,315 to 1,908,117 Atu4739 Atu4740: Atu4740 - zinc-binding dehydrogenase, at 1,908,230 to 1,909,303 Atu4740
Group Condition Atu4736 Atu4737 Atu4738 Atu4739 Atu4740
phage AgroPhage_C04 -0.1 -1.2 -0.0 -0.1 -0.8
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 -0.4 -0.7 +0.1 -0.4
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.0 -0.3 -0.7 -0.2 +0.2
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 -0.3 -0.9 +0.1 +0.3
phage AgroPhage_F04 -0.1 -0.3 +0.4 -0.3 -0.2
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.0 -0.3 -0.7 +0.1 +0.3
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 -0.2 +0.3 -0.1 -0.7
no phage P5L5 +0.2 -0.3 -0.6 +0.1 +0.1
phage AgroPhage_E10 -0.3 +0.7 +0.1 -0.2 -0.7
nitrogen source DL-2-Aminobutyric (N) -0.1 +0.1 -0.6 +0.7 -0.4
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.1 +0.4 -0.5 +0.3 -0.4
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.0 +0.2 -0.8 +0.2 +0.1
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.2 -0.7 +0.3 -0.1 +0.7
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.0 -0.4 -0.5 -0.2 +1.0
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.0 +0.7 -0.9 +0.0 +0.1
phage Phage 95.3 + bacteria -0.0 -0.7 +0.3 +0.1 +0.3
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.1 +0.6 +0.2 -0.0 -0.4
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.6 +0.3 -0.3 -0.0 -0.5
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.0 -0.8 +0.5 +0.2 +0.2
lb_tobacco_leaf LB_Tobacco_Leaf +0.3 +0.3 -0.6 -0.0 +0.4
phage AgroPhage_H04 -0.0 +0.7 -0.5 -0.1 +0.3
phage AgroPhage_B07 -0.0 +0.6 -0.5 -0.2 +0.5
lb_sorghum btx 430 LB_Sorghum Btx 430 -0.0 +0.6 -0.3 +0.1 +0.3
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 -0.5 +0.4 +0.4 +0.2
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.3 +0.9 -0.0 -0.0 -0.4
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 -0.2 +1.3 -0.1 -0.0
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.3 +0.1 +0.0 +0.3 +0.6
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 +0.5 +0.3 +0.1 +0.3
stress R2A with m-arsenite 0.8 mM +0.1 +0.9 -0.3 +0.0 +0.9
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.4 +1.4 -0.3 +0.2 +0.2
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