Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu4734 and Atu4736 are separated by 408 nucleotidesAtu4736 and Atu4737 are separated by 198 nucleotidesAtu4737 and Atu4738 are separated by 204 nucleotidesAtu4738 and Atu4739 are separated by 53 nucleotides Atu4734: Atu4734 - bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase, at 1,899,905 to 1,902,694 Atu4734 Atu4736: Atu4736 - methyl-accepting chemotaxis protein, at 1,903,103 to 1,905,046 Atu4736 Atu4737: Atu4737 - hypothetical protein, at 1,905,245 to 1,905,427 Atu4737 Atu4738: Atu4738 - chloramphenicol acetyltransferase, at 1,905,632 to 1,906,261 Atu4738 Atu4739: Atu4739 - flavin-containing monooxygenase, at 1,906,315 to 1,908,117 Atu4739
Group Condition Atu4734 Atu4736 Atu4737 Atu4738 Atu4739
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.4 -0.0 -0.3 -0.7 -0.2
phage AgroPhage_C04 +0.1 -0.1 -1.2 -0.0 -0.1
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.2 -0.2 -0.7 +0.3 -0.1
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 -0.1 -0.3 -0.9 +0.1
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.1 +0.1 -0.4 -0.7 +0.1
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.6 +0.1 +0.2 -0.4 -0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.6 +0.5 -0.0 -0.5 +0.0
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.5 +0.0 -0.5 +0.3 +0.2
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.4 +0.0 +0.7 -0.9 +0.0
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.3 -0.4 +0.4 -0.2 +0.1
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.3 -0.1 +0.4 -0.5 +0.3
stress R2A with Vancomycin 0.009 mM -1.1 +0.1 -0.0 +0.8 -0.1
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.1 +0.1 +0.4 -0.7 +0.1
stress Pyrogallol 0.5 mM -0.9 +0.0 +0.3 +0.3 +0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.3 +0.0 +0.4 -0.4 +0.2
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.0 -0.0 -0.8 +0.5 +0.2
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.3 -0.0 +0.2 -0.8 +0.2
phage Phage 95.3 + bacteria +0.2 -0.0 -0.7 +0.3 +0.1
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.3 -0.2 +0.6 +0.1 -0.2
nitrogen source DL-2-Aminobutyric (N) +0.0 -0.1 +0.1 -0.6 +0.7
phage AgroPhage_E10 -0.2 -0.3 +0.7 +0.1 -0.2
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.3 +0.3 -0.5 +0.4 +0.4
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 +0.6 +0.3 -0.3 -0.0
r2a_control R2A control +0.5 -0.2 -0.0 +0.5 +0.0
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.3 +0.1 -0.2 +1.3 -0.1
stress R2A with m-arsenite 0.8 mM +0.1 +0.1 +0.9 -0.3 +0.0
stress R2A with Paraquat dichloride 0.75 mM +0.3 -0.2 +0.1 +0.7 +0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.1 +0.4 +1.4 -0.3 +0.2
stress R2A with Cobalt chloride 0.02 mM +1.5 +0.1 +0.1 -0.1 -0.1
stress R2A with tungstate 375 mM +5.9 +0.0 +0.0 +0.3 -0.0
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