Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu4726 and Atu4727 are separated by 114 nucleotidesAtu4727 and Atu4728 are separated by 459 nucleotidesAtu4728 and Atu4729 are separated by 180 nucleotidesAtu4729 and Atu4730 overlap by 7 nucleotides Atu4726: Atu4726 - superoxide dismutase, at 1,889,112 to 1,889,807 Atu4726 Atu4727: Atu4727 - hypothetical protein, at 1,889,922 to 1,890,911 Atu4727 Atu4728: Atu4728 - ABC transporter permease, at 1,891,371 to 1,893,173 Atu4728 Atu4729: Atu4729 - ABC transporter permease, at 1,893,354 to 1,894,955 Atu4729 Atu4730: Atu4730 - hypothetical protein, at 1,894,949 to 1,895,899 Atu4730
Group Condition Atu4726 Atu4727 Atu4728 Atu4729 Atu4730
stress R2A with Spectinomycin 0.002 mM +0.0 -0.1 -2.3 -0.0 +0.1
stress R2A with Spectinomycin 0.002 mM +0.2 -0.0 -2.5 +0.0 +0.2
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.2 -0.5 -0.3 -0.2 +0.0
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.3 -0.8 +0.1 +0.1 -0.2
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.4 -0.3 +0.1 -0.1 -0.4
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.2 -0.4 +0.0 -0.0 -0.5
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.4 -0.2 +0.2 -0.3 -0.3
phage AgroPhage_B07 -0.5 -0.6 -0.0 +0.1 -0.0
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.3 -0.3 +0.0 +0.2 -0.5
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -0.7 -0.3 +0.3 -0.1 -0.2
lb LB -0.2 -0.4 +0.2 -0.1 -0.3
lb LB -0.3 -0.3 +0.3 -0.2 -0.2
lb_tobacco_leaf LB_Tobacco_Leaf -0.3 -0.5 +0.2 +0.1 -0.2
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 -0.3 -0.1 -0.4 -0.2
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -0.5 -0.2 +0.3 +0.1 -0.3
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -0.2 -0.5 +0.2 +0.1 -0.3
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days -0.3 -0.1 +0.2 +0.1 -0.4
phage AgroPhage_A07 -0.2 -0.6 +0.0 -0.2 +0.3
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days -0.3 -0.3 +0.2 +0.2 -0.3
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.2 -0.2 +0.2 +0.2 -0.5
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.2 -0.2 +0.2 +0.2 -0.4
stress R2A with Tetracycline 0.002 mM +0.1 +0.3 -0.7 +0.0 -0.1
phage AgroPhage_H10 -0.5 +0.1 -0.2 +0.3 +0.3
stress R2A with Tetracycline 0.002 mM +0.4 -0.2 -0.6 +0.0 +0.5
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 -0.4 +0.2 +0.2 +0.3
phage AgroPhage_D10 +0.2 -0.4 +0.1 -0.0 +0.6
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 +0.3 +0.1 +0.3 -0.2
stress R2A with Nalidixic 0.02 mM +0.4 +0.1 -0.1 +0.1 +0.5
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 +0.1 -0.2 +0.4 +0.4
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.0 +0.5 +0.1 +0.0 +0.7
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