Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu4706 and Atu4707 overlap by 4 nucleotidesAtu4707 and Atu4708 are separated by 4 nucleotidesAtu4708 and Atu4709 are separated by 74 nucleotidesAtu4709 and Atu4710 are separated by 115 nucleotides Atu4706: Atu4706 - formate dehydrogenase subunit gamma, at 1,867,324 to 1,867,803 Atu4706 Atu4707: Atu4707 - NADH ubiquinone oxidoreductase chain F, at 1,867,800 to 1,869,356 Atu4707 Atu4708: Atu4708 - formate dehydrogenase alpha subunit, at 1,869,361 to 1,872,243 Atu4708 Atu4709: Atu4709 - NAD-dependent formate dehydrogenase subunit delta, at 1,872,318 to 1,872,662 Atu4709 Atu4710: Atu4710 - MFS permease, at 1,872,778 to 1,874,430 Atu4710
Group Condition Atu4706 Atu4707 Atu4708 Atu4709 Atu4710
carbon source L-ascorbate (C) -0.7 -1.0 -1.0 N.D. -0.5
carbon source L-ascorbate (C) -0.6 -0.4 -0.5 N.D. -0.3
phage AgroPhage_C10 -0.3 -1.1 -0.0 N.D. -0.1
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.0 -0.8 -0.3 N.D. -0.3
phage AgroPhage_E10 -0.5 -0.4 -0.2 N.D. -0.1
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.7 -0.2 +0.1 N.D. -0.3
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.4 -0.5 -0.1 N.D. -0.1
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.3 -0.4 -0.2 N.D. -0.1
phage AgroPhage_H04 -0.6 -0.5 -0.0 N.D. +0.2
lb_sorghum b5 999 LB_Sorghum B5 999 -0.6 -0.2 -0.1 N.D. +0.1
lb_tomato_root LB_Tomato_root -0.4 -0.3 -0.1 N.D. +0.2
stress R2A with tungstate 375 mM +0.2 -0.7 +0.1 N.D. +0.0
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.6 -0.2 -0.0 N.D. -0.3
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.4 -0.4 -0.1 N.D. +0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.7 -0.0 -0.1 N.D. -0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.3 +0.3 +0.0 N.D. +0.5
Atjh15 -0.3 +0.5 +0.2 N.D. +0.0
stress R2A with Gallium(III) chloride 0.02 mM +0.4 +0.6 -0.2 N.D. -0.2
Atjh10 +0.3 +0.3 +0.2 N.D. -0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +1.0 -0.2 -0.1 N.D. +0.1
Atjh10 +0.4 +0.5 +0.2 N.D. -0.2
nitrogen source DL-2-Aminobutyric (N) +1.4 +0.3 -0.3 N.D. -0.4
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.6 +0.4 +0.0 N.D. -0.0
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 +0.5 +0.0 N.D. +0.3
carbon source L-Alanine (C) +0.3 +0.3 +0.3 N.D. +0.2
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 +0.7 -0.1 N.D. +0.4
stress R2A with Vancomycin 0.009 mM +0.1 +0.8 +0.2 N.D. +0.2
Atjh14 +0.7 +0.8 +0.3 N.D. -0.1
stress R2A with Chlorite 0.2 mM +2.9 +3.2 +3.4 N.D. +4.2
stress R2A with Chlorite 0.2 mM +3.0 +3.6 +3.4 N.D. +4.2
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