Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu4700 and Atu4701 overlap by 4 nucleotidesAtu4701 and Atu4702 are separated by 8 nucleotidesAtu4702 and Atu4703 are separated by 129 nucleotidesAtu4703 and Atu4704 are separated by 21 nucleotides Atu4700: Atu4700 - oligopeptide ABC transporter ATPase, at 1,862,000 to 1,862,974 Atu4700 Atu4701: Atu4701 - oligopeptide ABC transporter ATPase, at 1,862,971 to 1,863,993 Atu4701 Atu4702: Atu4702 - GntR family transcriptional regulator, at 1,864,002 to 1,864,679 Atu4702 Atu4703: Atu4703 - hypothetical protein, at 1,864,809 to 1,865,438 Atu4703 Atu4704: Atu4704 - hydantoin racemase, at 1,865,460 to 1,866,182 Atu4704
Group Condition Atu4700 Atu4701 Atu4702 Atu4703 Atu4704
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.2 -0.4 -1.6 -0.2 -0.1
stress R2A with Phosphomycin 50 mM -0.0 +0.0 -1.9 -0.2 -0.3
carbon source D-Saccharic potassium salt (C) -0.0 +0.0 -1.8 +0.0 -0.4
nitrogen source Orotic (N) -0.1 -0.1 -2.0 -0.0 -0.0
carbon source D-Saccharic potassium salt (C) +0.0 -0.1 -1.8 -0.0 -0.2
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.0 -0.8 -1.0 -0.1 -0.3
carbon source L-Sorbose (C) -0.1 -0.0 -1.9 -0.1 +0.0
carbon source L-Sorbose (C) -0.0 -0.1 -2.0 +0.1 -0.1
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -0.1 +0.2 -1.5 -0.3 -0.3
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.1 -0.4 -1.3 +0.1 -0.3
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days +0.0 -0.2 -1.4 -0.1 -0.3
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.1 -0.1 -1.2 -0.2 -0.3
carbon source Beta-alanine (C) -0.0 +0.1 -1.9 +0.0 -0.0
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.1 +0.1 -1.3 -0.1 -0.4
phage AgroPhage_C04 +0.2 -0.4 -0.9 -0.4 -0.2
carbon source Xylitol (C) -0.0 -0.2 -1.6 +0.1 -0.1
carbon source Xylitol (C) +0.0 +0.1 -2.0 +0.0 +0.1
nitrogen source Orotic (N) +0.1 +0.1 -1.7 -0.1 -0.0
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.2 -0.0 -1.1 -0.4 -0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.1 +0.2 -1.0 -0.6 -0.1
stress R2A with Phosphomycin 50 mM +0.0 +0.1 -1.8 +0.1 +0.2
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.1 -0.3 -0.7 -0.5 +0.3
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 +0.5 -1.5 -0.1 -0.2
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.0 +0.4 -0.7 -0.5 -0.4
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.0 +0.6 -1.1 -0.6 +0.3
phage AgroPhage_D04 +0.0 -0.6 +0.8 -0.2 -0.5
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.1 +0.1 -0.8 -0.3 +0.9
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 +0.7 -0.3 -0.0 -0.6
carbon source N-alpha-Acetyl-L-glutamate (C) +0.0 +0.1 +10.9 -0.1 -0.0
carbon source N-alpha-Acetyl-L-glutamate (C) -0.1 -0.2 +11.8 -0.0 -0.1
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