Fitness for 5 genes in Agrobacterium fabrum C58

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 953 experiments or choose conditions or try the comparative fitness browser

500 ntAtu4696 and Atu4697 are separated by 18 nucleotidesAtu4697 and Atu4698 are separated by 5 nucleotidesAtu4698 and Atu4699 overlap by 1 nucleotidesAtu4699 and Atu4700 are separated by 1 nucleotides Atu4696: Atu4696 - oligopeptide ABC transporter permease, at 1,857,372 to 1,858,340 Atu4696 Atu4697: Atu4697 - oligopeptide ABC transporter permease, at 1,858,359 to 1,859,306 Atu4697 Atu4698: Atu4698 - cytosine deaminase, at 1,859,312 to 1,860,505 Atu4698 Atu4699: Atu4699 - N-ethylammeline chlorohydrolase, at 1,860,505 to 1,861,998 Atu4699 Atu4700: Atu4700 - oligopeptide ABC transporter ATPase, at 1,862,000 to 1,862,974 Atu4700
Group Condition Atu4696 Atu4697 Atu4698 Atu4699 Atu4700
phage AgroPhage_C10 -0.6 -0.9 -0.4 +0.2 -0.2
phage AgroPhage_C04 -1.0 -0.6 -0.1 -0.0 +0.2
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.6 -0.7 -0.3 +0.1 +0.3
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.2 -0.2 -0.5 +0.0 -0.2
phage AgroPhage_F04 -0.4 +0.2 -0.0 -0.4 -0.4
phage AgroPhage_E10 +0.1 -0.0 -0.1 -0.7 -0.2
nitrogen source DL-2-Aminobutyric (N) -0.3 -0.3 -0.0 +0.1 -0.3
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.2 -0.7 +0.1 -0.2 -0.1
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.4 -0.6 -0.2 +0.3 +0.4
no phage P2L5 +0.4 -0.4 -0.2 -0.1 +0.1
phage AgroPhage_H10 -0.1 +0.3 -0.3 -0.2 +0.2
phage AgroPhage_D10 -0.6 +0.3 -0.2 +0.0 +0.3
phage AgroPhage_F10 +0.0 +0.6 -0.4 -0.2 -0.1
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.2 +0.5 -0.1 -0.1 -0.1
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days +0.2 +0.3 -0.2 -0.4 +0.0
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.0 +0.3 +0.3 -0.3 -0.2
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 -0.5 +0.0 +0.0 +0.3
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 +0.7 -0.3 -0.2 -0.1
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.2 +0.7 -0.5 -0.1 +0.0
carbon source D-Saccharic potassium salt (C) -0.2 +0.6 +0.2 -0.2 +0.0
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.6 +0.6 +0.0 -0.1 +0.6
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.1 -0.2 +0.7 +0.1 -0.0
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.5 -0.2 -0.0 -0.0 +0.4
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.2 +0.3 +0.2 +0.2 +0.2
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.3 +0.4 +0.2 +0.3 +0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD2.0 +0.4 +0.4 +0.0 +0.2 -0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 -0.1 +0.2 +0.2 +0.2
in planta Plant=Cucumber; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.5 +0.3 +0.1 -0.0 +0.1
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.5 +0.5 -0.0 +0.1 +0.0
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.3 +0.7 -0.0 +0.2 +0.2
remove
Atu4696
plot		 remove
Atu4697
plot		 remove
Atu4698		 remove
Atu4699
plot		 remove
Atu4700
plot