Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu4693 and Atu4694 are separated by 191 nucleotidesAtu4694 and Atu4695 are separated by 162 nucleotidesAtu4695 and Atu4696 are separated by 217 nucleotidesAtu4696 and Atu4697 are separated by 18 nucleotides Atu4693: Atu4693 - outer membrane protein, at 1,852,650 to 1,853,717 Atu4693 Atu4694: Atu4694 - chlorohydrolase, at 1,853,909 to 1,855,426 Atu4694 Atu4695: Atu4695 - oligopeptide ABC transporter substrate-binding protein, at 1,855,589 to 1,857,154 Atu4695 Atu4696: Atu4696 - oligopeptide ABC transporter permease, at 1,857,372 to 1,858,340 Atu4696 Atu4697: Atu4697 - oligopeptide ABC transporter permease, at 1,858,359 to 1,859,306 Atu4697
Group Condition Atu4693 Atu4694 Atu4695 Atu4696 Atu4697
phage AgroPhage_C04 -0.0 +0.0 -0.0 -1.0 -0.6
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.4 -0.2 +0.2 -0.4 -0.6
phage AgroPhage_C10 +0.4 -0.1 -0.1 -0.6 -0.9
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 -0.0 -0.1 -0.6 -0.7
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.6 +0.2 -0.1 -0.4 +0.0
phage AgroPhage_F04 -0.0 -0.3 -0.2 -0.4 +0.2
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.6 -0.3 -0.1 +0.3 +0.1
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.5 -0.1 +0.3 -0.6 +0.6
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.2 -0.5 +0.2 -0.1 +0.3
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.4 -0.0 +0.2 +0.3 -0.3
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.2 +0.5 -0.4 -0.2 -0.0
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.0 +0.3 +0.0 +0.2 -0.7
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.3 +0.2 -0.1 -0.3 -0.3
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.6 -0.3 +0.0 +0.3 -0.5
phage AgroPhage_D10 +0.2 +0.3 -0.2 -0.6 +0.3
no phage P2L5 +0.4 +0.1 +0.0 +0.4 -0.4
phage AgroPhage_D04 +0.4 +0.4 -0.0 +0.0 -0.3
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days +0.3 +0.2 -0.3 +0.2 +0.3
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 +0.4 +0.3 +0.0 -0.2
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.0 +0.6 -0.2 +0.4 -0.1
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 +0.0 -0.3 +0.2 +0.7
carbon source D-Saccharic potassium salt (C) -0.0 +0.3 +0.2 -0.2 +0.6
phage AgroPhage_F10 +0.4 +0.1 -0.2 +0.0 +0.6
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.4 +0.3 -0.1 +0.5 -0.0
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.2 +0.0 +0.5 +0.2 +0.2
nitrogen source DL-2-Aminobutyric (N) +1.5 +0.3 +0.2 -0.3 -0.3
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.3 +0.0 +0.2 +0.3 +0.7
carbon source D-Saccharic potassium salt (C) +0.2 +1.1 -0.1 +0.0 +0.4
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.3 +0.8 -0.2 +0.5 +0.5
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.3 +0.2 +0.6 +0.1 +0.7
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