Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu4688 and Atu4689 overlap by 4 nucleotidesAtu4689 and Atu4690 are separated by 43 nucleotidesAtu4690 and Atu4691 are separated by 23 nucleotidesAtu4691 and Atu4692 are separated by 225 nucleotides Atu4688: Atu4688 - amino acid ABC transporter permease, at 1,846,751 to 1,847,455 Atu4688 Atu4689: Atu4689 - amino acid ABC transporter permease, at 1,847,452 to 1,848,111 Atu4689 Atu4690: Atu4690 - amino acid ABC transporter ATPase/permease, at 1,848,155 to 1,848,823 Atu4690 Atu4691: Atu4691 - 2-hydroxyacid dehydrogenase, at 1,848,847 to 1,849,782 Atu4691 Atu4692: Atu4692 - diguanylate cyclase, at 1,850,008 to 1,852,182 Atu4692
Group Condition Atu4688 Atu4689 Atu4690 Atu4691 Atu4692
carbon source L-ascorbate (C) -4.6 -4.6 -4.7 -5.9 +0.2
carbon source 2-Keto-D-gluconic hemicalcium salt (C) -3.3 -3.1 -3.0 -4.7 +0.1
carbon source 2-Keto-D-gluconic hemicalcium salt (C) -3.0 -2.6 -3.4 -4.4 +0.0
carbon source L-ascorbate (C) -1.8 -1.7 -1.9 -5.6 +0.1
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.9 -0.4 -0.3 -0.2 +0.2
phage AgroPhage_E10 +0.0 -0.0 -0.4 -0.6 -0.3
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.3 -0.5 +0.3 -0.2 -0.2
phage AgroPhage_C10 +0.1 -0.2 +0.3 -0.8 +0.0
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 -0.2 -0.2 +0.4 -0.4
phage AgroPhage_E04 +0.3 -0.3 -0.3 -0.3 +0.1
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.0 -0.3 +0.5 -0.2 -0.4
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.3 -0.4 +0.3 +0.3 -0.3
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.2 -0.2 -0.5 +0.1 +0.2
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 -0.7 +0.2 +0.0 +0.4
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.6 -0.0 -0.1 +0.4 +0.1
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.4 -0.4 +0.0 -0.2 +0.3
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 -0.4 -0.0 +0.7 -0.0
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.4 -0.0 +0.5 +0.2 +0.1
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.2 +0.4 +0.3 +0.1 -0.2
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 +0.4 +0.3 -0.1 -0.2
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 -0.4 +0.2 +0.0 +0.3
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.3 +0.1 -0.0 -0.4 +0.6
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.4 +0.8 -0.3 -0.3 -0.0
phage AgroPhage_B07 -0.3 +0.3 +0.2 +0.2 +0.2
phage AgroPhage_H04 -0.2 +0.2 +0.3 +0.3 +0.3
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.3 -0.2 +0.5 -0.0 +0.2
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.4 +0.2 -0.3 +0.4 +0.2
no phage P2L5 -0.3 +0.3 +0.6 +0.5 +0.0
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.0 +0.3 +0.6 +0.5 -0.2
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 +0.1 +0.6 +0.5 -0.3
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