Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu4666 and Atu4667 are separated by 11 nucleotidesAtu4667 and Atu4668 overlap by 4 nucleotidesAtu4668 and Atu4669 are separated by 269 nucleotidesAtu4669 and Atu4670 are separated by 258 nucleotides Atu4666: Atu4666 - HlyD family secretion protein, at 1,825,088 to 1,826,152 Atu4666 Atu4667: Atu4667 - ABC transporter permease, at 1,826,164 to 1,828,941 Atu4667 Atu4668: Atu4668 - ABC transporter permease, at 1,828,938 to 1,830,056 Atu4668 Atu4669: Atu4669 - hypothetical protein, at 1,830,326 to 1,830,793 Atu4669 Atu4670: Atu4670 - hypothetical protein, at 1,831,052 to 1,831,294 Atu4670
Group Condition Atu4666 Atu4667 Atu4668 Atu4669 Atu4670
stress Chloramphenicol 12.5 ug/mL -1.9 -0.5 -0.6 -2.4 -0.7
stress Erythromycin 12.5 ug/mL -0.3 -0.4 -0.3 -2.1 +0.0
stress Chloramphenicol 12.5 ug/mL +0.3 -0.5 -0.2 -2.5 +0.0
stress Erythromycin 12.5 ug/mL -0.1 -0.3 -0.3 -1.9 +0.2
stress Chloramphenicol 6.25 ug/mL -0.5 -0.2 -0.3 -1.0 -0.3
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -1.0 -0.1 -0.6 -0.2 -0.3
stress Chloramphenicol 6.25 ug/mL -0.3 -0.3 -0.1 -0.8 -0.5
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.7 -0.1 -0.3 -0.1 -0.3
phage Phage 100.1 + bacteria -0.3 -0.1 +0.0 -0.8 -0.5
phage Phage 100.2 + bactiera +0.2 -0.2 +0.0 -0.9 -0.5
phage AgroPhage_C04 +0.1 -0.2 -0.5 +0.2 -0.7
stress Streptomycin 200 ug/mL +0.1 +0.1 +0.2 -1.1 -0.2
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.8 -0.3 -0.5 +0.3 +0.5
stress R2A with Vancomycin 0.009 mM -0.2 +0.1 +0.3 -1.1 +0.3
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.7 -0.1 -0.3 +0.1 +0.5
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.6 +0.2 -0.4 +0.3 +0.2
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.5 -0.1 +0.4 -0.3 +0.3
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.5 +0.0 +0.4 -0.2 -0.6
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.4 +0.4 +0.2 +0.5 -0.5
stress R2A with tungstate 375 mM +0.2 -0.1 +0.1 -0.7 +1.0
phage AgroPhage_C10 +0.5 +0.1 +0.1 +0.5 -0.6
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.5 +0.2 -0.3 -0.1 +0.5
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.5 +0.2 -0.3 +0.2 +0.5
Atjh14 -0.4 -0.1 +0.0 +0.2 +1.4
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +1.0 +0.1 -0.2 -0.1 +0.5
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.9 +0.1 +0.2 -0.1 +0.4
phage AgroPhage_E04 +0.3 +0.3 +0.3 +0.1 +0.7
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.4 +0.3 +0.2 +0.2 +0.6
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.4 -0.2 -0.3 +0.6 +1.4
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.2 +0.4 +0.7 +0.8 +0.4
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