Fitness for 5 genes in Agrobacterium fabrum C58

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 1014 experiments or choose conditions or try the comparative fitness browser

500 ntAtu4664 and Atu4665 are separated by 22 nucleotidesAtu4665 and Atu4666 are separated by 291 nucleotidesAtu4666 and Atu4667 are separated by 11 nucleotidesAtu4667 and Atu4668 overlap by 4 nucleotides Atu4664: Atu4664 - oligopeptide ABC transporter ATPase, at 1,821,733 to 1,823,400 Atu4664 Atu4665: Atu4665 - alpha-galactosidase, at 1,823,423 to 1,824,796 Atu4665 Atu4666: Atu4666 - HlyD family secretion protein, at 1,825,088 to 1,826,152 Atu4666 Atu4667: Atu4667 - ABC transporter permease, at 1,826,164 to 1,828,941 Atu4667 Atu4668: Atu4668 - ABC transporter permease, at 1,828,938 to 1,830,056 Atu4668
Group Condition Atu4664 Atu4665 Atu4666 Atu4667 Atu4668
carbon source D-Raffinose (C) -5.4 -6.4 +0.1 -0.1 +0.0
carbon source D-Raffinose (C) -5.1 -4.9 -0.0 -0.1 -0.1
carbon source Melibiose (C) -5.0 -4.9 -0.3 +0.1 -0.0
carbon source Melibiose (C) -4.6 -5.4 +0.1 +0.0 -0.0
carbon source Stachyose (C) -3.7 -5.7 -0.2 +0.0 +0.1
carbon source Stachyose (C) -4.3 -4.8 +0.0 +0.1 +0.0
stress Chloramphenicol 12.5 ug/mL -0.1 -0.2 -1.9 -0.5 -0.6
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.4 -0.5 -0.7 -0.1 -0.3
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.1 +0.0 -1.0 -0.1 -0.6
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.3 -0.1 -0.7 -0.1 -0.3
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 +0.1 -0.8 -0.3 -0.5
carbon source Beta-Lactose (C) +0.1 -1.3 -0.1 -0.1 +0.1
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.0 -0.4 -0.6 +0.0 -0.3
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.3 +0.1 -0.6 +0.2 -0.4
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.3 -0.5 +0.2 -0.4 -0.1
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.1 -0.8 -0.2 +0.3 +0.1
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.3 -0.4 -0.5 -0.1 +0.4
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.0 -0.5 -0.4 +0.4 +0.2
carbon source Asolectin from soybean (C) -0.2 -0.6 +0.0 +0.2 +0.4
phage AgroPhage_D10 -0.4 -0.4 +0.1 +0.4 +0.2
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.5 -0.5 +1.0 +0.1 -0.2
phage AgroPhage_C04 +0.1 +0.4 +0.1 -0.2 -0.5
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.0 -0.3 +0.7 +0.2 -0.2
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.2 +0.5 +0.5 +0.2 -0.3
phage AgroPhage_E04 -0.3 +0.2 +0.3 +0.3 +0.3
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.3 +0.0 +0.9 +0.1 +0.2
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.3 +0.6 +0.5 +0.0 +0.4
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.1 +0.5 +0.4 +0.3 +0.2
phage AgroPhage_C10 -0.1 +0.9 +0.5 +0.1 +0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 +0.6 +0.2 +0.4 +0.7
remove
Atu4664
plot		 remove
Atu4665
plot		 remove
Atu4666		 remove
Atu4667
plot		 remove
Atu4668
plot