Fitness for 5 genes in Agrobacterium fabrum C58

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	Atu4646	Atu4647	Atu4648	Atu4649	Atu4650
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.4	-0.3	-0.2	-0.6	-0.3
phage	AgroPhage_D10	-0.2	-0.5	-0.3	-0.1	-0.4
in planta	Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.5	-0.6	-0.2	-0.2	-0.2
nophagecontrol	No phage control	-0.3	-0.5	-0.1	-0.1	-0.4
carbon source	D-Sorbitol (C)	-0.3	-0.2	-0.2	-0.3	-0.3
in planta	Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.2	-0.4	-0.2	-0.2	-0.2
phage	AgroPhage_B07	-0.3	-0.1	+0.0	-0.3	-0.5
phage	AgroPhage_B01	-0.1	-0.2	-0.2	-0.4	-0.2
in planta	Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.4	+0.3	+0.2	-0.4	-0.6
in planta	Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.6	+0.2	-0.1	+0.1	-0.5
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.3	-0.3	-0.0	-0.6	+0.2
in planta	Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	-0.2	-0.4	+0.1	+0.0	-0.5
in planta	Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days	-0.4	+0.0	-0.2	+0.1	-0.4
in planta	Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.5	+0.2	+0.2	-0.2	-0.4
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.2	-0.3	+0.1	+0.1	-0.7
in planta	Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.1	-0.4	+0.3	-0.2	-0.2
in planta	Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	-0.1	+0.3	-0.5	-0.1	-0.1
phage	AgroPhage_F10	-0.0	+0.1	+0.3	-0.3	-0.6
phage	AgroPhage_E10	+0.1	+0.1	+0.1	-1.0	+0.2
in planta	Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	-0.2	-0.1	+0.1	+0.3	-0.4
in planta	Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	-0.0	+0.4	-0.3	+0.1	-0.3
in planta	Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.6	-0.2	-0.1	+0.6	+0.3
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.2	-0.0	+0.5	-0.3	+0.1
in planta	Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.2	-0.4	+0.6	+0.2	+0.3
in planta	Plant=Cucumber; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	-0.1	+0.3	-0.1	+0.2	+0.5
in planta	Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.4	+0.5	+0.2	-0.3	+0.8
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.3	+0.2	+0.5	+0.2	-0.3
phage	Phage 95.3 + bacteria	+0.4	-0.0	+0.1	+0.4	+0.3
in planta	Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.3	+0.8	-0.1	-0.1	+1.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.4	+0.3	+0.1	+0.5	+0.5