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Protein
Homologs
Fitness for 5 genes in
Agrobacterium fabrum C58
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500 nt
Atu4639 and Atu4640 are separated by 35 nucleotides
Atu4640 and Atu4641 are separated by 61 nucleotides
Atu4641 and Atu4642 are separated by 208 nucleotides
Atu4642 and Atu4643 are separated by 96 nucleotides
Atu4639: Atu4639 - two component sensor kinase, at 1,790,804 to 1,792,138
Atu4639
Atu4640: Atu4640 - hypothetical protein, at 1,792,174 to 1,793,121
Atu4640
Atu4641: Atu4641 - LysR family transcriptional regulator, at 1,793,183 to 1,794,091
Atu4641
Atu4642: Atu4642 - catalase, at 1,794,300 to 1,796,471
Atu4642
Atu4643: Atu4643 - hypothetical protein, at 1,796,568 to 1,796,744
Atu4643
Group
Condition
Atu4639
Atu4640
Atu4641
Atu4642
Atu4643
phage
AgroPhage_E10
-0.2
-0.6
-1.4
N.D.
-0.7
in planta
Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
-0.1
-0.2
-1.7
N.D.
+0.1
in planta
Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days
-0.1
-0.3
-1.3
N.D.
-0.2
in planta
Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days
-0.2
-0.4
-1.2
N.D.
+0.0
in planta
Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
-0.2
-0.0
-1.1
N.D.
-0.4
in planta
Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days
-0.1
+0.1
-1.1
N.D.
-0.6
in planta
Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
-0.2
+0.3
-0.3
N.D.
-1.4
in planta
Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
+0.2
-0.2
-0.9
N.D.
-0.7
in planta
Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
-0.0
-0.1
-0.4
N.D.
-1.0
in planta
Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
+0.1
-0.1
-1.1
N.D.
-0.5
in planta
Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
-0.2
+0.3
-0.6
N.D.
-1.0
nitrogen source
DL-2-Aminobutyric (N)
-0.3
+0.2
-0.5
N.D.
-0.7
in planta
Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
-0.2
+0.1
-0.8
N.D.
-0.4
in planta
Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.0
-0.2
-1.9
N.D.
+0.9
in planta
Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
-0.1
-0.0
-1.3
N.D.
+0.3
in planta
Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
+0.1
+0.1
-1.3
N.D.
+0.1
in planta
Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.2
-0.3
+0.3
N.D.
-1.0
in planta
Plant=Arabidopsis_efr; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days
+0.1
+0.3
-1.0
N.D.
-0.2
in planta
Plant=Arabidopsis_col0; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days
-0.2
-0.1
-0.7
N.D.
+0.4
in planta
Plant=Arabidopsis_col0; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
+0.2
-0.1
-1.0
N.D.
+0.4
in planta
Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
+0.1
+0.4
-1.3
N.D.
+0.2
in planta
Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.1
+0.3
-1.0
N.D.
+0.2
in planta
Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
-0.3
-0.1
-0.6
N.D.
+0.5
in planta
Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.2
-0.3
-0.6
N.D.
+0.8
phage
AgroPhage_C04
-0.3
-0.3
+0.8
N.D.
+0.1
carbon source
L-ascorbate (C)
-0.2
+0.1
+1.2
N.D.
-0.4
phage
AgroPhage_D10
-0.2
+0.3
+0.6
N.D.
+0.6
in planta
Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
-0.1
+0.0
+1.5
N.D.
+0.2
carbon source
L-ascorbate (C)
-0.1
-0.1
+1.6
N.D.
+0.2
carbon source
D-Saccharic potassium salt (C)
+0.3
-0.2
+1.5
N.D.
+0.8
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