Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu4639 and Atu4640 are separated by 35 nucleotidesAtu4640 and Atu4641 are separated by 61 nucleotidesAtu4641 and Atu4642 are separated by 208 nucleotidesAtu4642 and Atu4643 are separated by 96 nucleotides Atu4639: Atu4639 - two component sensor kinase, at 1,790,804 to 1,792,138 Atu4639 Atu4640: Atu4640 - hypothetical protein, at 1,792,174 to 1,793,121 Atu4640 Atu4641: Atu4641 - LysR family transcriptional regulator, at 1,793,183 to 1,794,091 Atu4641 Atu4642: Atu4642 - catalase, at 1,794,300 to 1,796,471 Atu4642 Atu4643: Atu4643 - hypothetical protein, at 1,796,568 to 1,796,744 Atu4643
Group Condition Atu4639 Atu4640 Atu4641 Atu4642 Atu4643
phage AgroPhage_E10 -0.2 -0.6 -1.4 N.D. -0.7
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.1 -0.2 -1.7 N.D. +0.1
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -0.1 -0.3 -1.3 N.D. -0.2
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -0.2 -0.4 -1.2 N.D. +0.0
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.2 -0.0 -1.1 N.D. -0.4
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -0.1 +0.1 -1.1 N.D. -0.6
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.2 +0.3 -0.3 N.D. -1.4
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.2 -0.2 -0.9 N.D. -0.7
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.0 -0.1 -0.4 N.D. -1.0
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 -0.1 -1.1 N.D. -0.5
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.2 +0.3 -0.6 N.D. -1.0
nitrogen source DL-2-Aminobutyric (N) -0.3 +0.2 -0.5 N.D. -0.7
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.2 +0.1 -0.8 N.D. -0.4
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.0 -0.2 -1.9 N.D. +0.9
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.1 -0.0 -1.3 N.D. +0.3
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.1 +0.1 -1.3 N.D. +0.1
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 -0.3 +0.3 N.D. -1.0
in planta Plant=Arabidopsis_efr; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days +0.1 +0.3 -1.0 N.D. -0.2
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days -0.2 -0.1 -0.7 N.D. +0.4
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.2 -0.1 -1.0 N.D. +0.4
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 +0.4 -1.3 N.D. +0.2
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 +0.3 -1.0 N.D. +0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.3 -0.1 -0.6 N.D. +0.5
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 -0.3 -0.6 N.D. +0.8
phage AgroPhage_C04 -0.3 -0.3 +0.8 N.D. +0.1
carbon source L-ascorbate (C) -0.2 +0.1 +1.2 N.D. -0.4
phage AgroPhage_D10 -0.2 +0.3 +0.6 N.D. +0.6
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.1 +0.0 +1.5 N.D. +0.2
carbon source L-ascorbate (C) -0.1 -0.1 +1.6 N.D. +0.2
carbon source D-Saccharic potassium salt (C) +0.3 -0.2 +1.5 N.D. +0.8
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