Fitness for 5 genes in Agrobacterium fabrum C58

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 953 experiments or choose conditions or try the comparative fitness browser

500 ntAtu4618 and Atu4619 are separated by 144 nucleotidesAtu4619 and Atu4620 are separated by 266 nucleotidesAtu4620 and Atu4621 overlap by 4 nucleotidesAtu4621 and Atu4622 overlap by 14 nucleotides Atu4618: Atu4618 - dTDP-rhamnose-3,5-epimerase, at 1,765,126 to 1,765,695 Atu4618 Atu4619: Atu4619 - ATP-dependent DNA helicase, at 1,765,840 to 1,767,906 Atu4619 Atu4620: Atu4620 - dipeptide ABC transporter ATPase, at 1,768,173 to 1,768,910 Atu4620 Atu4621: Atu4621 - dipeptide ABC transporter ATPase, at 1,768,907 to 1,769,752 Atu4621 Atu4622: Atu4622 - dipeptide ABC transporter permease, at 1,769,739 to 1,770,638 Atu4622
Group Condition Atu4618 Atu4619 Atu4620 Atu4621 Atu4622
stress R2A with Polymyxin B sulfate 0.00075 mM -7.5 -0.0 +0.1 +0.0 -0.1
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -6.1 -0.2 -0.4 -0.4 -0.1
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -6.0 -0.1 -0.1 -0.3 -0.1
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -6.6 +0.1 +0.2 -0.6 +0.3
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -6.0 -0.2 -0.3 +0.2 -0.0
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -5.8 -0.1 -0.4 +0.1 +0.0
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -5.9 -0.1 -0.2 +0.1 -0.1
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -5.6 -0.1 -0.0 -0.1 -0.2
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -5.4 -0.1 -0.2 +0.2 -0.0
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -5.1 -0.1 -0.2 +0.0 -0.1
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -5.7 +0.1 +0.2 -0.1 +0.1
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -5.2 +0.1 -0.3 -0.1 +0.1
carbon source cholate (C) -5.1 +0.0 +0.2 -0.0 -0.2
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -4.7 +0.0 -0.2 -0.1 -0.1
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -4.8 +0.1 -0.1 -0.2 +0.1
in planta Plant=Sorghum_NK_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -5.0 +0.1 +0.1 -0.1 -0.0
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -4.9 +0.2 +0.1 -0.0 -0.2
in planta Plant=Sorghum_NK_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -4.4 +0.0 -0.3 +0.0 -0.3
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -5.1 +0.3 +0.1 -0.1 -0.0
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -4.4 +0.1 -0.3 -0.1 +0.1
carbon source cholate (C) -5.0 +0.0 +0.2 +0.1 +0.1
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -4.5 -0.0 -0.1 +0.2 +0.2
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -4.5 +0.1 +0.2 -0.2 +0.3
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -4.4 -0.0 -0.2 +0.5 +0.2
phage Phage 95.3 + bacteria +5.8 +0.0 -0.1 +0.1 -0.1
phage Phage 95.3 + bacteria +6.6 -0.1 -0.1 -0.0 -0.1
phage AgroPhage_C10 +7.4 +0.0 -0.5 -0.2 -0.5
phage Phage 95.3 + bacteria +6.5 +0.1 +0.1 -0.0 -0.0
phage AgroPhage_C04 +6.6 -0.1 +0.4 -0.1 +0.1
phage phage 95.1 +7.7 -0.1 -0.1 -0.0 +0.1
remove
Atu4618
plot		 remove
Atu4619
plot		 remove
Atu4620		 remove
Atu4621
plot		 remove
Atu4622
plot