Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu4591 and Atu4592 are separated by 98 nucleotidesAtu4592 and Atu4593 are separated by 14 nucleotidesAtu4593 and Atu4594 are separated by 8 nucleotidesAtu4594 and Atu4595 are separated by 8 nucleotides Atu4591: Atu4591 - LysR family transcriptional regulator, at 1,737,812 to 1,738,717 Atu4591 Atu4592: Atu4592 - hypothetical protein, at 1,738,816 to 1,739,610 Atu4592 Atu4593: Atu4593 - 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase, at 1,739,625 to 1,740,473 Atu4593 Atu4594: Atu4594 - hypothetical protein, at 1,740,482 to 1,741,168 Atu4594 Atu4595: Atu4595 - dehydrogenase, at 1,741,177 to 1,741,926 Atu4595
Group Condition Atu4591 Atu4592 Atu4593 Atu4594 Atu4595
phage AgroPhage_E10 -1.0 -0.8 -0.2 -0.3 -0.1
phage AgroPhage_C04 -0.2 -0.2 -0.3 -0.5 -0.0
phage AgroPhage_A05 -0.3 -0.7 +0.1 -0.0 -0.2
in planta Plant=Arabidopsis_efr; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.4 -0.2 -0.1 +0.2 -0.5
nophagecontrol No phage control -0.6 +0.1 -0.1 -0.4 +0.1
Atjh10 -0.3 -0.5 -0.1 -0.0 +0.4
Atjh14 -0.4 -0.1 -0.3 -0.1 +0.4
nophagecontrol No phage control -0.2 +0.5 +0.0 -0.2 -0.6
Atjh15 -0.0 -0.6 +0.3 -0.1 +0.2
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.4 -0.4 +0.2 +0.5 -0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.0 -0.4 +0.5 -0.2 +0.0
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.2 -0.6 +0.2 -0.2 +0.7
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days +0.2 -0.3 +0.2 -0.4 +0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.3 +0.4 -0.2 +0.1 -0.4
carbon source D-Galacturonic Acid (C) +0.2 +0.6 +0.0 -0.1 -0.3
in planta Bethi_Library_OD0.05 -0.1 -0.4 +0.1 +0.3 +0.4
stress Chloramphenicol 12.5 ug/mL -0.5 -0.0 +0.3 +0.1 +0.4
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.5 +0.3 +0.1 -0.1 -0.3
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.4 +0.2 +0.1 +0.1 +0.4
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 +0.3 -0.1 +0.2 -0.3
stress Chloramphenicol 12.5 ug/mL -0.4 +0.7 +0.1 +0.0 +0.3
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 +0.6 -0.4 +0.1 +0.4
stress Streptomycin 100 ug/mL +0.2 -0.2 +0.2 +0.3 +0.4
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.3 +0.5 +0.2 +0.1 +0.3
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.3 +0.5 +0.6 -0.2 -0.1
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 +0.8 +0.1 +0.1 +0.2
in planta Bethi_Library_OD0.01 +0.3 +0.2 +0.1 +0.1 +0.5
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 -0.1 +0.4 +0.3 +0.6
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 -0.1 +0.5 +0.6 +0.4
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.4 +1.3 +0.2 +0.3 +0.2
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