Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu4584 and Atu4585 are separated by 46 nucleotidesAtu4585 and Atu4586 are separated by 85 nucleotidesAtu4586 and Atu4587 are separated by 138 nucleotidesAtu4587 and Atu4588 are separated by 78 nucleotides Atu4584: Atu4584 - TetR family transcriptional regulator, at 1,732,293 to 1,732,862 Atu4584 Atu4585: Atu4585 - hypothetical protein, at 1,732,909 to 1,733,436 Atu4585 Atu4586: Atu4586 - choloylglycine hydrolase family protein, at 1,733,522 to 1,734,589 Atu4586 Atu4587: Atu4587 - hypothetical protein, at 1,734,728 to 1,735,528 Atu4587 Atu4588: Atu4588 - sodium bile acid symporter family protein, at 1,735,607 to 1,736,230 Atu4588
Group Condition Atu4584 Atu4585 Atu4586 Atu4587 Atu4588
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.6 +0.0 -1.3 +0.3 -1.1
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 -0.6 -1.0 -0.1 -0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 -0.9 -0.6 -0.6 +0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.2 -0.5 -1.0 -0.0 -0.1
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.0 -0.6 -0.0 -0.5 -0.6
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.1 -0.9 -0.8 -0.1 +0.2
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.4 +0.1 -0.8 -0.7 -0.6
phage AgroPhage_D04 +0.1 -0.2 -0.8 -0.3 -0.2
phage AgroPhage_F04 -0.5 +0.2 -0.9 -0.1 +0.2
stress R2A with tungstate 375 mM +0.2 -0.9 +0.6 -0.8 +0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 +0.3 -1.2 -0.7 +0.5
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 -0.3 -0.4 +0.3 -0.5
phage AgroPhage_H10 -0.1 +0.2 -0.9 -0.3 +0.3
stress R2A with sodium fluoride 0.2 mM +0.1 -0.1 +0.5 -0.4 -0.6
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.7 -0.6 -0.0 +0.2 +0.7
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.3 -0.4 +0.4 +0.2 +0.4
phage AgroPhage_E04 +0.0 +0.9 -0.9 -0.4 +0.7
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 +0.0 -0.5 -0.2 +0.7
phage AgroPhage_A07 +0.2 +0.5 -0.6 -0.1 +0.5
Atjh14 -0.5 -0.1 +0.9 +0.2 -0.0
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 -0.3 -0.4 +1.0 +0.3
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.4 -0.4 +0.6 +0.2 +0.7
stress R2A with Tetracycline 0.002 mM -0.3 +0.3 +0.7 -0.1 +0.2
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.5 +0.5 -0.2 +0.2 +0.8
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.4 +0.5 +0.4 +0.3 +0.1
phage AgroPhage_F10 +0.4 +0.3 +0.4 -0.3 +0.2
nitrogen source DL-2-Aminobutyric (N) -0.3 -1.2 +1.3 +0.3 +1.2
carbon source D-Saccharic potassium salt (C) +0.3 +0.2 +0.7 -0.2 +0.2
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.4 +0.2 +0.6 -0.3 +0.2
stress Chloramphenicol 12.5 ug/mL +0.0 +0.4 +0.5 +0.6 +0.6
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