Fitness for 5 genes in Agrobacterium fabrum C58

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	Atu4582	Atu4583	Atu4584	Atu4585	Atu4586
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.6	-0.3	+0.1	-0.9	-0.6
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.2	+0.1	-0.2	-0.5	-0.9
in planta	Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.7	-0.2	+0.2	-0.3	-0.4
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	-0.1	-0.8	-0.1	+0.3	-0.7
in planta	Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.3	+0.3	-0.1	-0.9	-0.8
in planta	Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.0	+0.4	-0.1	-0.6	-1.0
in planta	Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+1.0	-0.2	-0.6	+0.0	-1.3
nitrogen source	DL-2-Aminobutyric (N)	-0.1	-0.5	-0.3	-1.2	+1.3
in planta	Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	-0.6	-0.5	-0.2	+0.5	+0.1
in planta	Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.4	+0.2	-0.3	-0.4	+0.4
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.0	+0.2	+0.1	+0.3	-1.2
phage	AgroPhage_C04	-0.3	+0.4	-0.4	+0.4	-0.3
phage	AgroPhage_D04	-0.1	+0.8	+0.1	-0.2	-0.8
pH	R2A pH 5.5	-0.4	+0.4	+0.3	+0.2	-0.7
in planta	Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.3	+1.0	-0.2	-0.2	-0.3
carbon source	D-Saccharic potassium salt (C)	-0.5	-0.4	+0.3	+0.2	+0.7
phage	AgroPhage_A07	+0.6	-0.2	+0.2	+0.5	-0.6
in planta	Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.4	+0.3	-0.5	+0.5	-0.2
in planta	Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	+0.6	+0.4	-0.2	+0.1	-0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+1.0	+0.3	-0.2	-0.2	-0.4
in planta	Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	+0.5	+0.4	+0.0	+0.2	-0.6
in planta	Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.6	+0.5	+0.4	+0.1	-0.8
in planta	Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.6	+0.3	-0.4	-0.4	+0.6
in planta	Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.1	-0.4	+0.4	+0.2	+0.6
phage	AgroPhage_E04	+0.6	+0.3	+0.0	+0.9	-0.9
phage	AgroPhage_F10	+0.5	-0.7	+0.4	+0.3	+0.4
in planta	Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.8	-0.4	+0.3	+0.1	+0.3
stress	R2A with Paraquat dichloride 0.75 mM	+0.2	+1.2	+0.0	-0.4	+0.1
stress	R2A with Tetracycline 0.002 mM	+0.1	+0.7	-0.3	+0.3	+0.7
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.5	-0.3	-0.1	+0.1	+1.6