Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu4580 and Atu4581 are separated by 190 nucleotidesAtu4581 and Atu4582 are separated by 44 nucleotidesAtu4582 and Atu4583 are separated by 104 nucleotidesAtu4583 and Atu4584 are separated by 164 nucleotides Atu4580: Atu4580 - hypothetical protein, at 1,729,367 to 1,730,323 Atu4580 Atu4581: Atu4581 - hypothetical protein, at 1,730,514 to 1,731,044 Atu4581 Atu4582: Atu4582 - ferredoxin, at 1,731,089 to 1,731,424 Atu4582 Atu4583: Atu4583 - superoxide dismutase, at 1,731,529 to 1,732,128 Atu4583 Atu4584: Atu4584 - TetR family transcriptional regulator, at 1,732,293 to 1,732,862 Atu4584
Group Condition Atu4580 Atu4581 Atu4582 Atu4583 Atu4584
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -1.8 +0.1 -0.3 -0.3 -0.3
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.0 -1.3 -0.1 -0.6 -0.3
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -1.5 -0.1 -0.5 +0.1 +0.0
Atjh14 -0.1 +0.1 +0.0 -1.5 -0.5
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -1.8 -0.5 -0.4 +1.0 -0.2
stress Streptomycin 200 ug/mL -0.3 -0.2 -0.8 -0.4 -0.2
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -1.3 -0.5 -0.1 -0.1 +0.2
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -1.4 +0.2 -0.0 +0.1 -0.5
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -1.3 -0.4 +0.3 +0.3 -0.5
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -1.2 +0.3 -0.7 +0.1 -0.0
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -1.6 +0.4 -0.4 +0.4 -0.1
stress Streptomycin 200 ug/mL -0.2 -0.1 -0.5 -0.5 +0.3
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.4 +0.6 -0.6 -0.3 +0.1
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.4 -0.4 +0.5 -0.3 +0.1
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -2.2 +0.3 +0.6 +0.5 +0.4
phage AgroPhage_E10 +0.7 -0.1 -0.6 -0.3 +0.1
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 +0.5 -0.7 -0.2 +0.2
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.8 +0.4 +0.2 +0.3 -0.1
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.2 +0.2 +0.9 -0.2 -0.6
phage AgroPhage_C10 +0.2 -0.2 +0.8 -0.3 -0.2
phage AgroPhage_C04 +0.9 -0.0 -0.3 +0.4 -0.4
phage AgroPhage_F10 +0.0 +0.5 +0.5 -0.6 +0.4
pH R2A pH 5.5 -0.1 +0.5 -0.4 +0.4 +0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.3 +0.2 +1.0 +0.3 -0.2
phage AgroPhage_E04 +0.5 -0.3 +0.6 +0.3 +0.0
phage AgroPhage_D04 +0.4 -0.2 +0.1 +0.8 +0.1
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.0 +0.6 +0.8 -0.4 +0.3
phage AgroPhage_D10 +0.5 +0.4 +0.4 +0.2 -0.2
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.0 +0.9 +0.6 +0.3 -0.4
stress R2A with Paraquat dichloride 0.75 mM -0.0 +0.4 +0.2 +1.2 +0.0
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