Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu4572 and Atu4573 overlap by 4 nucleotidesAtu4573 and Atu4574 are separated by 62 nucleotidesAtu4574 and Atu4575 are separated by 54 nucleotidesAtu4575 and Atu4576 are separated by 133 nucleotides Atu4572: Atu4572 - hypothetical protein, at 1,720,353 to 1,721,249 Atu4572 Atu4573: Atu4573 - inositol monophosphatase, at 1,721,246 to 1,722,031 Atu4573 Atu4574: Atu4574 - dehydrogenase, at 1,722,094 to 1,722,843 Atu4574 Atu4575: Atu4575 - AraC family transcriptional regulator, at 1,722,898 to 1,723,863 Atu4575 Atu4576: Atu4576 - ROK family transcriptional regulator, at 1,723,997 to 1,725,070 Atu4576
Group Condition Atu4572 Atu4573 Atu4574 Atu4575 Atu4576
stress R2A with Phosphomycin 50 mM +0.0 -0.1 +0.1 -0.1 -2.8
stress R2A with Phosphomycin 50 mM -0.1 -0.0 +0.1 +0.0 -2.6
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.1 +0.2 -0.2 -0.4 -1.4
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.0 -0.1 -0.4 -0.3 -1.0
carbon source D-Ribose (C) +0.1 -0.0 -0.1 -0.2 -1.3
carbon source Uridine 5-monophosphate (C) +0.2 +0.0 -0.3 -0.1 -1.4
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.2 +0.0 -0.3 -0.1 -1.3
carbon source Uridine 5-monophosphate (C) +0.0 +0.0 +0.3 -0.1 -1.8
carbon source Xylitol (C) +0.1 -0.0 -0.1 -0.1 -1.2
carbon source D-Saccharic potassium salt (C) +0.2 -0.1 +0.4 +0.2 -2.1
carbon source D-Galacturonic Acid (C) +0.0 -0.1 -0.1 +0.2 -1.3
carbon source NAG (C) +0.3 -0.1 +0.1 +0.0 -1.4
carbon source D-Saccharic potassium salt (C) +0.4 +0.0 +0.5 -0.2 -1.8
carbon source methyl-alpha-D-xylopyranoside (C) -0.1 +0.2 +0.2 -0.2 -1.2
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.0 -0.3 +0.4 -0.2 -0.9
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 -0.1 -0.6 +0.4 -0.5
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.0 +0.2 +0.3 -0.3 -1.0
Atjh14 +0.2 -0.9 +0.3 -0.1 +0.3
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 -0.2 +1.0 -0.1 -0.5
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.5 +0.4 +0.3 -0.4 -0.5
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 +0.6 +0.5 -0.3 -0.3
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.4 +0.6 +0.8 -0.6 +0.0
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.3 +0.3 +0.8 +0.2 -0.3
phage AgroPhage_C04 -0.2 +0.6 +0.3 -0.3 +0.5
Atjh2 +0.2 -0.1 +0.3 +0.3 +0.7
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.5 +0.0 +0.6 +1.4 -1.0
stress R2A with Vancomycin 0.009 mM +0.1 +0.1 +0.5 +0.3 +1.0
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.4 +0.3 +0.9 +0.7 -0.2
stress R2A with Vancomycin 0.009 mM +0.1 +0.2 +0.6 +0.2 +1.2
stress R2A with tungstate 375 mM -0.1 +0.1 +0.2 +0.1 +5.2
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