Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu4569 and Atu4570 overlap by 1 nucleotidesAtu4570 and Atu4571 overlap by 1 nucleotidesAtu4571 and Atu4572 are separated by 46 nucleotidesAtu4572 and Atu4573 overlap by 4 nucleotides Atu4569: Atu4569 - ABC transporter permease, at 1,717,549 to 1,718,589 Atu4569 Atu4570: Atu4570 - ABC transporter permease, at 1,718,589 to 1,719,443 Atu4570 Atu4571: Atu4571 - ABC transporter permease, at 1,719,443 to 1,720,306 Atu4571 Atu4572: Atu4572 - hypothetical protein, at 1,720,353 to 1,721,249 Atu4572 Atu4573: Atu4573 - inositol monophosphatase, at 1,721,246 to 1,722,031 Atu4573
Group Condition Atu4569 Atu4570 Atu4571 Atu4572 Atu4573
Atjh14 +0.1 -0.5 +0.2 +0.2 -0.9
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 +0.0 -0.6 -0.0 -0.3
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.5 -0.2 +0.0 -0.3 +0.3
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 +0.4 -0.5 -0.4 -0.2
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.4 +0.4 -0.6 +0.0 +0.2
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 -0.3 -0.4 +0.2 -0.1
phage AgroPhage_B07 +0.3 -0.3 +0.3 -0.4 -0.2
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.2 -0.1 -0.4 +0.5 -0.0
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.0 +0.2 -0.7 +0.2 +0.1
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.0 +0.5 -0.1 -0.2 -0.3
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.5 -0.3 -0.2 -0.2 +0.1
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 +0.2 -0.3 -0.3 +0.1
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.2 +0.5 -0.1 +0.1 -0.3
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.2 +0.6 -0.0 -0.7 +0.2
phage AgroPhage_D07 +0.1 -0.2 +0.4 -0.1 -0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.1 +0.4 +0.3 -0.4 -0.1
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 +0.5 -0.4 +0.2 -0.2
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days +0.2 -0.1 +0.4 -0.1 -0.4
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.3 +0.1 -0.4 +0.2 -0.1
phage AgroPhage_E04 +0.1 -0.0 +0.3 -0.4 +0.3
phage AgroPhage_C04 +0.2 +0.0 -0.2 -0.2 +0.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.2 +0.6 -0.4 -0.0 -0.0
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.4 +0.3 -0.1 +0.4 +0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.1 -0.2 +0.0 +0.7 -0.0
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.3 +0.5 -0.2 +0.2 +0.5
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.4 +0.3 +0.4 -0.4 +0.6
phage AgroPhage_E10 +0.3 -0.1 +0.5 +0.1 +0.3
stress Chloramphenicol 12.5 ug/mL +0.1 +0.6 +0.2 +0.2 +0.1
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 +0.1 +0.0 +0.5 +0.4
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.0 +1.2 -0.0 +0.5 +0.0
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