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Protein
Homologs
Fitness for 5 genes in
Agrobacterium fabrum C58
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Atu4555 and Atu4556 are separated by 191 nucleotides
Atu4556 and Atu4557 are separated by 9 nucleotides
Atu4557 and Atu4558 are separated by 272 nucleotides
Atu4558 and Atu4559 are separated by 1 nucleotides
Atu4555: Atu4555 - hypothetical protein, at 1,700,967 to 1,701,752
Atu4555
Atu4556: Atu4556 - LacI family transcriptional regulator, at 1,701,944 to 1,703,005
Atu4556
Atu4557: Atu4557 - sugar ABC transporter permease, at 1,703,015 to 1,703,794
Atu4557
Atu4558: Atu4558 - sugar ABC transporter permease, at 1,704,067 to 1,705,062
Atu4558
Atu4559: Atu4559 - sugar ABC transporter ATPase, at 1,705,064 to 1,706,167
Atu4559
Group
Condition
Atu4555
Atu4556
Atu4557
Atu4558
Atu4559
phage
AgroPhage_C10
-0.2
-0.4
-0.0
-0.6
-0.3
in planta
Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
+0.3
-0.2
-0.2
-0.7
-0.6
carbon source
D-Saccharic potassium salt (C)
+0.0
-1.5
+0.1
-0.2
+0.2
carbon source
D-Saccharic potassium salt (C)
-0.2
-1.0
-0.1
-0.2
+0.3
phage
AgroPhage_E10
-0.7
-0.3
-0.2
-0.3
+0.3
in planta
Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
+0.0
-0.8
-0.1
-0.4
+0.2
in planta
Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
-0.2
-0.2
-0.2
+0.3
-0.6
in planta
Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
-0.0
-0.5
+0.6
-0.5
-0.4
stress
R2A with m-arsenite 0.8 mM
-0.3
-0.6
-0.2
-0.1
+0.5
in planta
Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
+0.2
-0.9
-0.2
-0.1
+0.4
in planta
Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
-0.1
-0.7
-0.2
+0.4
+0.1
in planta
Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
+0.2
-1.0
+0.2
-0.1
+0.2
in planta
Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
-0.0
-0.7
+0.7
-0.1
-0.2
in planta
Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
+0.1
+0.2
+0.4
-0.5
-0.3
in planta
Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
-0.5
+0.6
+0.2
-0.2
-0.2
nitrogen source
DL-2-Aminobutyric (N)
+0.7
+0.0
-0.3
-0.2
-0.3
in planta
Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD0.075
+0.2
-0.6
+0.2
+0.3
-0.2
in planta
Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.3
+0.4
-0.6
-0.2
+0.0
in planta
Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
-0.0
-0.1
-0.1
-0.3
+0.8
in planta
Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
+0.1
-0.6
+0.1
+0.1
+0.5
in planta
Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.3
+0.5
+0.1
-0.3
-0.3
in planta
Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
-0.4
+0.2
+0.0
+0.5
+0.2
in planta
Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
+0.5
-0.6
+0.3
+0.2
+0.1
in planta
Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
-0.2
+0.6
+0.4
-0.3
+0.4
in planta
Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.4
+0.7
-0.3
-0.1
+0.3
in planta
Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
-0.2
+0.2
+0.2
+0.3
+0.6
in planta
Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
-0.2
+0.9
+0.2
+0.3
-0.0
in planta
Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.0
+0.8
+0.1
-0.1
+0.4
in planta
Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
+0.4
+0.2
+0.9
+0.3
-0.3
in planta
Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.5
+0.5
+0.4
+0.3
+0.6
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