Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu4550 and Atu4551 are separated by 284 nucleotidesAtu4551 and Atu4552 are separated by 136 nucleotidesAtu4552 and Atu4553 are separated by 49 nucleotidesAtu4553 and Atu4554 are separated by 10 nucleotides Atu4550: Atu4550 - LacI family transcriptional regulator, at 1,695,677 to 1,696,705 Atu4550 Atu4551: Atu4551 - ABC transporter substrate binding protein, at 1,696,990 to 1,697,931 Atu4551 Atu4552: Atu4552 - ABC transporter substrate binding protein, at 1,698,068 to 1,698,991 Atu4552 Atu4553: Atu4553 - myo-inositol catabolism protein, at 1,699,041 to 1,699,937 Atu4553 Atu4554: Atu4554 - myo-inositol 2-dehydrogenase, at 1,699,948 to 1,700,958 Atu4554
Group Condition Atu4550 Atu4551 Atu4552 Atu4553 Atu4554
Atjh14 -0.3 -0.5 -1.0 -0.2 -0.7
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.1 -0.3 -0.3 -0.4 -0.3
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 -0.3 -0.4 -0.2 -0.5
Atjh15 +0.0 -0.2 -0.1 -0.4 -0.5
Atjh2 -0.3 -0.1 -0.1 -0.3 -0.3
phage AgroPhage_E10 -0.1 -0.4 -0.1 -0.5 +0.2
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.0 -0.3 -0.4 +0.1 -0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.1 -0.2 -0.2 +0.2 -0.4
phage AgroPhage_C10 +0.3 -0.6 +0.2 -0.1 -0.1
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.2 +0.1 -0.3 -0.5 +0.0
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.0 +0.3 -0.2 +0.2 -0.5
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.0 -0.2 +0.2 -0.4 +0.2
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 -0.1 +0.2 +0.0 -0.4
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 -0.4 -0.3 +0.6 -0.2
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 +0.1 +0.0 -0.5 +0.1
in planta Bethi_Library_OD0.5 +0.1 +0.2 +0.3 -0.3 +0.1
nitrogen source DL-2-Aminobutyric (N) -0.1 +0.0 -0.3 +0.1 +0.6
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.2 +0.3 +0.2 -0.1 +0.2
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 +0.2 +0.2 -0.3 +0.1
in planta Bethi_Library_OD0.5_6week -0.0 +0.1 +0.5 -0.3 +0.2
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.4 -0.1 +0.5 -0.3 +0.2
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.1 -0.1 +0.4 +0.6 -0.2
phage AgroPhage_C04 +0.2 -0.4 +0.3 +0.5 +0.2
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.5 +0.2 -0.5 +0.4 +0.2
phage AgroPhage_D04 +0.4 +0.2 +0.3 -0.1 +0.1
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.1 +0.2 +0.5 +0.2 -0.1
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 +0.0 +0.7 +0.1 +0.3
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.0 +0.4 +0.6 -0.1 +0.3
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.5 +0.1 +0.2 +0.4 +0.2
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.0 +0.3 +0.6 +0.1 +0.3
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