Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu4534 and Atu4535 are separated by 36 nucleotidesAtu4535 and Atu4536 are separated by 43 nucleotidesAtu4536 and Atu4537 are separated by 10 nucleotidesAtu4537 and Atu4538 are separated by 368 nucleotides Atu4534: Atu4534 - amino acid ABC transporter substrate-binding protein, at 1,681,305 to 1,682,141 Atu4534 Atu4535: Atu4535 - amino acid ABC transporter substrate-binding protein, at 1,682,178 to 1,683,017 Atu4535 Atu4536: Atu4536 - amino acid ABC transporter permease, at 1,683,061 to 1,683,711 Atu4536 Atu4537: Atu4537 - amino acid ABC transporter permease, at 1,683,722 to 1,684,390 Atu4537 Atu4538: Atu4538 - 3-carboxy-cis,cis-muconate cycloisomerase, at 1,684,759 to 1,685,820 Atu4538
Group Condition Atu4534 Atu4535 Atu4536 Atu4537 Atu4538
carbon source D-Quinic (C) -4.4 -5.1 -4.5 -5.1 -7.2
carbon source D-Quinic (C) -4.7 -4.9 -4.4 -4.8 -6.8
carbon source Protocatechuic Acid (C) +0.0 -0.1 -0.1 -0.2 -8.3
carbon source Protocatechuic Acid (C) -0.1 +0.1 +0.0 -0.3 -7.6
carbon source 4-Hydroxybenzoic Acid (C) +0.1 -0.1 -0.1 -0.1 -4.3
carbon source 4-Hydroxybenzoic Acid (C) +0.1 -0.3 -0.0 +0.1 -4.3
carbon source 4-Hydroxybenzoic Acid (C) +0.1 +0.2 +0.1 +0.0 -4.5
carbon source Ferulic Acid (C) -0.2 -0.3 +0.1 -0.3 -3.0
carbon source p-Coumaric (C) +0.0 -0.0 -0.0 +0.1 -3.6
carbon source 4-Hydroxybenzoic Acid (C) +0.0 -0.1 -0.2 +0.0 -3.3
carbon source p-Coumaric (C) +0.1 +0.1 +0.2 -0.3 -3.6
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.4 -0.5 -0.3 -0.8 -1.2
carbon source Ferulic Acid (C) -0.1 +0.2 +0.2 -0.1 -2.4
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.0 -0.1 -1.0 -0.8 -0.1
carbon source Phloretic Acid (C) +0.0 +0.1 +0.0 +0.2 -2.2
carbon source Phloretic Acid (C) +0.1 +0.2 +0.0 -0.1 -1.9
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.2 -0.1 -0.7 -0.7 -0.3
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.2 -0.2 -0.4 +0.6 -1.3
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.3 -0.6 -0.0 -0.8 +0.5
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.3 -0.1 +0.4 -1.0 -0.3
lb_sorghum_leaf LB_sorghum_leaf -0.1 +0.3 -0.1 +0.1 -1.4
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 +0.2 -0.4 +0.6 -1.1
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 +0.8 -0.0 -0.2 -0.7
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.5 +0.9 +0.3 +0.1 -0.6
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.4 -0.1 +0.1 +0.7 -0.8
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 +0.2 +0.4 +0.4 -0.8
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.3 +0.4 -0.2 +0.8 -0.8
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 +0.5 -0.1 +0.8 -0.5
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.0 +0.5 +0.2 +1.2 -0.8
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.0 +1.3 +0.2 -0.0 -0.3
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