Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu4523 and Atu4524 are separated by 6 nucleotidesAtu4524 and Atu4525 are separated by 219 nucleotidesAtu4525 and Atu4526 are separated by 41 nucleotidesAtu4526 and Atu4527 are separated by 81 nucleotides Atu4523: Atu4523 - oligopeptide ABC transporter permease, at 1,670,219 to 1,671,067 Atu4523 Atu4524: Atu4524 - oligopeptide ABC transporter permease, at 1,671,074 to 1,671,868 Atu4524 Atu4525: Atu4525 - oligopeptide ABC transporter substrate-binding protein, at 1,672,088 to 1,673,623 Atu4525 Atu4526: Atu4526 - ABC transporter permease, at 1,673,665 to 1,675,485 Atu4526 Atu4527: Atu4527 - hypothetical protein, at 1,675,567 to 1,675,728 Atu4527
Group Condition Atu4523 Atu4524 Atu4525 Atu4526 Atu4527
nitrogen source DL-2-Aminobutyric (N) -0.1 -0.5 -0.7 -0.2 -2.1
in planta Plant=Arabidopsis_efr; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.2 -0.0 -0.2 -0.0 -1.6
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.4 +0.4 +0.2 -0.3 -1.8
phage AgroPhage_D10 -0.3 -1.0 +0.1 +0.3 -0.7
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.3 -0.4 -0.3 +0.0 -1.1
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.7 -0.6 +0.7 -0.0 -0.8
stress R2A with Tetracycline 0.002 mM +0.0 +0.2 -0.2 +0.1 -1.5
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.0 +0.2 -0.3 +0.4 -1.6
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.2 +0.3 +0.0 +0.5 -1.9
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.2 +0.1 +0.2 +0.5 -1.6
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 +0.2 -0.7 -0.4 +0.7
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.4 -0.2 +0.3 +0.0 +1.0
carbon source D-Saccharic potassium salt (C) +0.5 +0.4 +0.2 +0.7 -0.4
no phage P2L5 +0.3 -0.4 +0.3 +0.1 +1.2
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.5 -0.1 -0.1 +0.5 +0.7
carbon source D-Saccharic potassium salt (C) +0.4 +0.7 +0.5 +0.3 -0.3
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.2 +0.9 -0.2 +0.7 -0.0
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.1 +0.9 +0.3 +0.1 +0.5
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.0 +0.3 +0.3 +0.3 +1.1
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.4 +0.6 +0.2 +0.4 +0.4
carbon source Ethyl benzoate (C) +0.3 +0.7 +0.6 +0.4 +0.3
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days +0.7 +0.7 +0.3 +0.8 -0.1
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days +0.5 +0.7 +0.7 +0.7 +0.1
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.1 +0.6 +0.6 +0.3 +1.3
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.2 +1.1 -0.4 +0.5 +1.7
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.4 +0.7 +0.5 +0.4 +0.9
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.6 +0.7 +0.7 +1.0 +0.3
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.5 +1.6 +0.2 +0.8 +0.4
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days +0.9 +0.8 +0.6 +0.8 +1.0
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days +1.1 +1.1 +0.7 +1.3 +0.6
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