Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu4507 and Atu4508 are separated by 134 nucleotidesAtu4508 and Atu4509 are separated by 223 nucleotidesAtu4509 and Atu4510 are separated by 99 nucleotidesAtu4510 and Atu4511 are separated by 1 nucleotides Atu4507: Atu4507 - dehydrogenase, at 1,653,012 to 1,653,974 Atu4507 Atu4508: Atu4508 - oxoreductase, at 1,654,109 to 1,655,236 Atu4508 Atu4509: Atu4509 - hypothetical protein, at 1,655,460 to 1,656,272 Atu4509 Atu4510: Atu4510 - hypothetical protein, at 1,656,372 to 1,657,280 Atu4510 Atu4511: Atu4511 - acetolactate synthase, at 1,657,282 to 1,659,108 Atu4511
Group Condition Atu4507 Atu4508 Atu4509 Atu4510 Atu4511
carbon source m-Inositol (C) +0.1 +0.1 -4.0 -4.3 -3.6
carbon source m-Inositol (C) -0.0 +0.1 -4.2 -3.8 -3.4
phage AgroPhage_C04 -0.2 -0.0 -0.4 -0.5 -0.5
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.8 -0.1 -0.2 -0.2 -0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.4 -0.6 -0.2 -0.3 +0.1
carbon source L-Galactose (C) -0.9 +0.0 -0.4 +0.1 -0.0
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.3 +0.2 -0.4 -0.0 -0.5
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.4 +0.2 -0.3 -0.4 +0.1
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.2 +0.2 +0.1 -0.1 -0.7
phage AgroPhage_A05 -0.4 +0.1 +0.3 -0.3 -0.2
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.4 +0.4 -0.2 -0.2 -0.1
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 -0.5 +0.0 +0.4 -0.1
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.4 +0.1 +0.1 +0.3 -0.2
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.2 +0.4 -0.6 +0.1 +0.0
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.2 -0.3 +0.2 +0.2 +0.3
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.4 -0.0 +0.4 -0.1 -0.2
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.3 +0.4 +0.1 -0.2 -0.2
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.4 -0.1 -0.5 +0.2 +0.3
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.2 -0.2 +0.4 -0.2 +0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD0.075 +0.1 +0.1 -0.3 +0.5 +0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.1 +0.4 -0.3 -0.1 +0.3
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.4 -0.3 -0.1 +0.5 +0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.1 -0.1 +0.8 +0.1 -0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 -0.1 +0.1 -0.1 +0.4
phage AgroPhage_E10 +0.2 -0.2 +0.4 +0.3 +0.0
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 +0.0 +0.4 -0.2 +0.3
phage AgroPhage_C10 +0.3 +0.5 -0.2 +0.0 +0.3
phage AgroPhage_B01 +0.2 +0.5 +0.1 +0.0 +0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD0.075 +0.0 +0.3 +0.2 +0.4 +0.3
nitrogen source DL-2-Aminobutyric (N) +0.2 +0.8 +0.1 +0.3 -0.0
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