Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu4500 and Atu4501 are separated by 212 nucleotidesAtu4501 and Atu4502 are separated by 484 nucleotidesAtu4502 and Atu4503 are separated by 115 nucleotidesAtu4503 and Atu4504 are separated by 79 nucleotides Atu4500: Atu4500 - MFS permease, at 1,645,850 to 1,647,082 Atu4500 Atu4501: Atu4501 - hypothetical protein, at 1,647,295 to 1,648,287 Atu4501 Atu4502: Atu4502 - cobalamin synthesis protein, at 1,648,772 to 1,649,899 Atu4502 Atu4503: Atu4503 - creatinine amidohydrolase, at 1,650,015 to 1,650,815 Atu4503 Atu4504: Atu4504 - MarR family transcriptional regulator, at 1,650,895 to 1,651,404 Atu4504
Group Condition Atu4500 Atu4501 Atu4502 Atu4503 Atu4504
stress R2A with m-arsenite 0.8 mM +0.1 -4.2 -4.5 N.D. -0.2
stress R2A with m-arsenite 0.8 mM -0.4 -3.3 -2.9 N.D. -0.1
carbon source L-ascorbate (C) +0.1 -1.9 -4.2 N.D. -0.2
carbon source L-ascorbate (C) -0.1 -1.1 -2.6 N.D. -0.2
carbon source L-Xylose (C) +0.1 -1.3 -2.4 N.D. -0.0
stress R2A with Paraquat dichloride 0.75 mM -0.2 -1.0 -1.9 N.D. +0.0
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD0.075 -0.1 -0.4 -2.5 N.D. +0.2
carbon source L-Xylose (C) -0.0 -1.0 -1.9 N.D. +0.1
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.4 -1.0 -0.6 N.D. -0.7
carbon source Ethyl benzoate (C) +0.1 -1.1 -1.7 N.D. -0.0
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD2.0 +0.0 -0.2 -2.7 N.D. +0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD2.0 -0.1 -0.2 -2.6 N.D. +0.3
carbon source Ethyl benzoate (C) +0.1 -1.2 -1.5 N.D. -0.0
carbon source anthranilamide (C) -0.1 -0.8 -1.5 N.D. -0.1
stress R2A with Paraquat dichloride 0.75 mM +0.0 -1.0 -1.5 N.D. +0.0
stress R2A with Manganese (II) chloride tetrahydrate 5 mM +0.0 -0.3 -1.4 N.D. -0.8
phage Phage 100.2 + bactiera -0.1 -1.0 -1.5 N.D. +0.1
phage Phage 100.2 + bactiera -0.1 -0.8 -1.5 N.D. +0.1
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 -1.1 -0.9 N.D. -0.5
phage Phage 100.2 + bactiera -0.2 -0.9 -1.3 N.D. +0.1
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 -0.9 -1.1 N.D. -0.5
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD0.075 -0.0 -0.3 -2.1 N.D. +0.2
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.2 -0.8 -1.5 N.D. +0.3
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.1 -1.0 -1.4 N.D. +0.2
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.2 -0.7 -2.0 N.D. +0.5
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD0.075 +0.1 +0.1 -2.2 N.D. +0.4
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.3 -0.9 -1.1 N.D. +0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.5 +0.1 -1.9 N.D. +0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.2 +0.3 -1.8 N.D. +0.3
stress R2A with Vancomycin 0.009 mM -0.3 +0.9 +1.6 N.D. +0.3
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