Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu4498 and Atu4499 overlap by 7 nucleotidesAtu4499 and Atu4500 are separated by 71 nucleotidesAtu4500 and Atu4501 are separated by 212 nucleotidesAtu4501 and Atu4502 are separated by 484 nucleotides Atu4498: Atu4498 - hypothetical protein, at 1,643,968 to 1,645,017 Atu4498 Atu4499: Atu4499 - hypothetical protein, at 1,645,011 to 1,645,778 Atu4499 Atu4500: Atu4500 - MFS permease, at 1,645,850 to 1,647,082 Atu4500 Atu4501: Atu4501 - hypothetical protein, at 1,647,295 to 1,648,287 Atu4501 Atu4502: Atu4502 - cobalamin synthesis protein, at 1,648,772 to 1,649,899 Atu4502
Group Condition Atu4498 Atu4499 Atu4500 Atu4501 Atu4502
stress R2A with m-arsenite 0.8 mM +0.4 -0.1 +0.1 -4.2 -4.5
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD0.075 -2.4 -3.0 -0.1 -0.4 -2.5
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD0.075 -2.6 -2.9 -0.0 -0.3 -2.1
stress R2A with EDTA 0.25 mM -3.5 -4.3 -0.0 -0.0 -0.0
carbon source L-ascorbate (C) -0.1 -0.4 +0.1 -1.9 -4.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -2.3 -2.1 -0.1 -0.1 -1.8
stress R2A with EDTA 0.25 mM -3.4 -2.9 -0.1 +0.1 -0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD2.0 -1.5 -2.0 -0.1 -0.2 -2.6
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD0.075 -1.8 -2.4 +0.1 -0.3 -1.8
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD0.075 -2.0 -2.1 -0.0 -0.0 -2.0
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -2.1 -2.4 -0.2 -0.1 -1.3
stress R2A with m-arsenite 0.8 mM -0.0 +0.6 -0.3 -3.3 -2.9
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD2.0 -1.1 -1.8 +0.0 -0.2 -2.7
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD0.075 -2.0 -1.8 +0.1 +0.1 -2.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -1.9 -2.4 +0.1 -0.0 -1.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD2.0 -1.3 -2.0 +0.1 -0.4 -1.4
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD2.0 -1.7 -1.4 +0.1 -0.2 -1.7
no phage P4L4 -1.3 -2.2 +0.2 -0.3 -1.3
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -1.7 -1.9 -0.0 +0.1 -1.3
carbon source L-ascorbate (C) -0.1 -0.3 -0.1 -1.1 -2.6
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -1.6 -1.3 +0.2 +0.0 -1.5
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD2.0 -1.1 -1.5 +0.1 -0.1 -1.5
no phage P2L4 -1.4 -1.2 +0.1 -0.2 -1.0
no phage P1L4 -1.4 -1.0 +0.1 -0.1 -1.3
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.9 -1.2 +0.2 +0.3 -1.8
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -1.2 -1.2 -0.0 +0.2 -1.2
no phage P3L4 -1.0 -1.4 +0.4 -0.2 -0.9
no phage P2L5 -1.3 -1.2 +0.4 -0.2 -0.8
carbon source L-Xylose (C) +0.4 +0.4 +0.1 -1.3 -2.4
carbon source sarcosine (C) +2.1 +1.8 -0.1 -0.4 +0.6
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