Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu4483 and Atu4484 overlap by 10 nucleotidesAtu4484 and Atu4485 are separated by 201 nucleotidesAtu4485 and Atu4486 are separated by 292 nucleotidesAtu4486 and Atu4487 are separated by 368 nucleotides Atu4483: Atu4483 - xylose isomerase, at 1,628,616 to 1,629,926 Atu4483 Atu4484: Atu4484 - hypothetical protein, at 1,629,917 to 1,630,402 Atu4484 Atu4485: Atu4485 - beta-glucosidase, at 1,630,604 to 1,631,983 Atu4485 Atu4486: Atu4486 - nitroreductase, at 1,632,276 to 1,632,905 Atu4486 Atu4487: Atu4487 - ABC transporter permease, at 1,633,274 to 1,634,314 Atu4487
Group Condition Atu4483 Atu4484 Atu4485 Atu4486 Atu4487
carbon source Xylobiose (C) -7.4 -0.0 -0.1 -0.4 -0.1
carbon source methyl-beta-D-xylopyranoside (C) -7.7 +0.1 +0.2 -0.1 +0.1
carbon source methyl-beta-D-xylopyranoside (C) -6.5 +0.2 +0.0 -0.2 -0.1
carbon source Xylobiose (C) -6.6 -0.1 +0.4 +0.1 -0.0
carbon source Xylobiose (C) -6.5 +0.1 +0.4 +0.1 +0.0
carbon source methyl-beta-D-xylopyranoside (C) -5.8 +0.0 +0.2 +0.1 -0.1
carbon source methyl-beta-D-xylopyranoside (C) -5.5 +0.0 +0.1 +0.2 -0.3
carbon source Xylobiose (C) -4.9 -0.1 +0.2 -0.0 +0.1
carbon source methyl-alpha-D-xylopyranoside (C) -3.7 -0.1 +0.1 +0.0 -0.4
carbon source D-Xylose (C) -3.4 +0.1 -0.2 -0.2 -0.1
carbon source D-Xylose (C) -3.1 -0.2 -0.2 +0.1 -0.1
carbon source methyl-alpha-D-xylopyranoside (C) -3.6 +0.2 +0.1 +0.2 +0.0
nitrogen source DL-2-Aminobutyric (N) -0.2 -0.4 -0.3 -0.3 -1.1
carbon source alpha-Lactose (C) +0.0 +0.3 -2.4 -0.1 +0.0
carbon source D-(-)-lyxose (C) -1.8 +0.1 +0.2 -0.2 -0.2
carbon source alpha-Lactose (C) -0.1 +0.0 -2.0 +0.4 -0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.3 -1.1 -0.3 -0.2 +0.5
carbon source D-(-)-lyxose (C) -1.5 -0.1 +0.3 -0.2 +0.1
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.0 -0.0 +0.0 -1.8 +0.6
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.2 -1.2 -0.0 +0.5 +0.7
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days -0.0 -0.5 -0.3 +0.7 +0.4
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.2 -0.5 -0.0 +0.8 +0.4
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.1 -0.7 -0.0 +0.5 +0.8
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 -0.4 +0.4 +0.5 -0.2
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.0 +0.2 +0.2 +0.8 -0.5
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 -0.5 +0.2 +1.0 +0.1
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.1 -0.3 +0.3 +0.7 +0.3
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.2 +0.9 +0.3 -0.3 +0.1
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.2 -0.9 +0.2 +1.2 +0.6
Atjh14 -0.4 +0.2 +0.1 +0.7 +0.9
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