Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu4468 and Atu4469 overlap by 4 nucleotidesAtu4469 and Atu4470 overlap by 20 nucleotidesAtu4470 and Atu4471 are separated by 2 nucleotidesAtu4471 and Atu4472 are separated by 284 nucleotides Atu4468: Atu4468 - iron transport ABC transporter permease, at 1,609,891 to 1,610,745 Atu4468 Atu4469: Atu4469 - iron ABC transporter permease, at 1,610,742 to 1,611,602 Atu4469 Atu4470: Atu4470 - iron ABC transporter ATPase, at 1,611,583 to 1,612,485 Atu4470 Atu4471: Atu4471 - ABC transporter substrate-binding protein, at 1,612,488 to 1,613,387 Atu4471 Atu4472: Atu4472 - hypothetical protein, at 1,613,672 to 1,614,580 Atu4472
Group Condition Atu4468 Atu4469 Atu4470 Atu4471 Atu4472
stress R2A with EDTA 0.25 mM -2.2 -2.9 -1.9 -2.4 +0.2
stress R2A with Calcium Chloride Dihydrate 87.5 mM -1.9 -2.2 -2.3 -1.9 -0.2
stress R2A with EDTA 0.25 mM -2.4 -1.3 -2.3 -2.2 +0.2
stress R2A with Calcium Chloride Dihydrate 87.5 mM -1.7 -1.6 -1.7 -1.9 -0.1
stress R2A with Strontium chloride 750 mM -1.6 -1.0 -1.6 -1.6 -0.0
stress R2A with Lithium chloride 900 mM -1.8 -1.3 -1.5 -1.4 +0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -1.5 -1.8 -1.3 -1.2 +0.3
stress R2A with Chloride 700 mM -1.4 -1.9 -1.1 -1.0 -0.0
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -1.2 -1.7 -0.8 -1.4 -0.2
stress R2A with Ceftazidime 4 mM -1.3 -1.1 -1.5 -1.5 +0.3
stress R2A with Strontium chloride 750 mM -1.6 -1.6 -1.0 -1.2 +0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -1.8 -1.0 -1.0 -1.2 +0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.5 -2.0 -1.0 -1.1 -0.2
stress R2A with molybdate 400 mM -1.3 -1.1 -1.1 -1.2 -0.1
stress R2A with molybdate 400 mM -1.1 -1.4 -1.1 -1.4 +0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.4 -1.4 -0.9 -1.2 +0.2
carbon source 2-Keto-D-gluconic hemicalcium salt (C) -0.9 -1.2 -1.1 -1.1 -0.3
stress R2A with Lithium chloride 900 mM -1.1 -0.7 -1.7 -1.2 +0.4
stress R2A with Ceftazidime 4 mM -1.0 -1.4 -1.1 -1.2 +0.5
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.7 -1.5 -1.3 -0.7 +0.1
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.5 -0.6 -1.5 -0.8 +0.2
stress R2A with Vancomycin 0.009 mM -1.0 -0.5 -1.0 -1.4 -0.0
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.1 -1.0 -1.2 -1.0 +0.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.4 -0.9 -1.5 -1.2 +1.2
stress R2A with Chlorate 400 mM -0.9 -0.7 -0.9 -1.1 +0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.6 -1.4 -1.0 -1.2 +3.1
stress Chloramphenicol 12.5 ug/mL +1.2 +1.1 +1.2 +1.0 +0.0
stress Chloramphenicol 12.5 ug/mL +1.3 +1.6 +1.4 +1.1 -0.5
stress R2A with m-arsenite 0.8 mM +1.2 +1.2 +1.6 +1.8 -0.1
stress R2A with m-arsenite 0.8 mM +1.2 +1.5 +2.0 +1.8 -0.4
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