Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu4465 and Atu4466 are separated by 197 nucleotidesAtu4466 and Atu4467 are separated by 55 nucleotidesAtu4467 and Atu4468 are separated by 206 nucleotidesAtu4468 and Atu4469 overlap by 4 nucleotides Atu4465: Atu4465 - transcriptional regulator, at 1,607,759 to 1,608,526 Atu4465 Atu4466: Atu4466 - oxidoreductase, at 1,608,724 to 1,609,455 Atu4466 Atu4467: Atu4467 - hypothetical protein, at 1,609,511 to 1,609,684 Atu4467 Atu4468: Atu4468 - iron transport ABC transporter permease, at 1,609,891 to 1,610,745 Atu4468 Atu4469: Atu4469 - iron ABC transporter permease, at 1,610,742 to 1,611,602 Atu4469
Group Condition Atu4465 Atu4466 Atu4467 Atu4468 Atu4469
stress R2A with EDTA 0.25 mM +0.0 +0.4 N.D. -2.2 -2.9
stress R2A with EDTA 0.25 mM -0.1 -0.3 N.D. -2.4 -1.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.5 +0.0 N.D. -1.6 -1.4
stress R2A with Calcium Chloride Dihydrate 87.5 mM +0.3 +0.3 N.D. -1.9 -2.2
stress R2A with Chloride 700 mM -0.0 +0.1 N.D. -1.4 -1.9
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.1 -0.2 N.D. -1.8 -1.0
stress R2A with Calcium Chloride Dihydrate 87.5 mM +0.2 +0.0 N.D. -1.7 -1.6
stress R2A with Lithium chloride 900 mM -0.1 +0.3 N.D. -1.8 -1.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.0 +0.4 N.D. -1.5 -1.8
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.2 +0.2 N.D. -1.4 -1.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.5 +0.2 N.D. -0.5 -2.0
stress R2A with molybdate 400 mM -0.3 +0.0 N.D. -1.1 -1.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.5 -0.3 N.D. -0.5 -1.4
stress R2A with Strontium chloride 750 mM +0.1 -0.1 N.D. -1.6 -1.0
carbon source L-Fucose (C) +1.1 -3.9 N.D. +0.1 +0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.1 +0.3 N.D. -1.2 -1.7
stress R2A with Strontium chloride 750 mM +0.2 +0.5 N.D. -1.6 -1.6
stress R2A with molybdate 400 mM -0.2 +0.2 N.D. -1.3 -1.1
carbon source L-Fucose (C) +1.0 -3.1 N.D. +0.0 -0.2
stress R2A with Ceftazidime 4 mM -0.0 +0.1 N.D. -1.3 -1.1
phage AgroPhage_B07 -0.2 +0.2 N.D. -0.1 -2.0
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.2 +0.4 N.D. -1.4 -0.9
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.2 +0.6 N.D. -1.5 -0.6
stress R2A with Ceftazidime 4 mM +0.1 +0.6 N.D. -1.0 -1.4
stress R2A with Vancomycin 0.009 mM +0.4 +0.8 N.D. -0.0 -1.5
stress Chloramphenicol 12.5 ug/mL -0.4 -0.1 N.D. +1.2 +1.1
stress Chloramphenicol 12.5 ug/mL -0.8 +0.1 N.D. +1.3 +1.6
stress R2A with Tetracycline 0.002 mM +0.2 +0.6 N.D. +0.6 +1.1
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +1.0 +0.5 N.D. +0.5 +0.9
stress R2A with m-arsenite 0.8 mM -0.1 +0.5 N.D. +1.2 +1.5
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