Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu4464 and Atu4465 are separated by 106 nucleotidesAtu4465 and Atu4466 are separated by 197 nucleotidesAtu4466 and Atu4467 are separated by 55 nucleotidesAtu4467 and Atu4468 are separated by 206 nucleotides Atu4464: Atu4464 - transaldolase B, at 1,606,687 to 1,607,652 Atu4464 Atu4465: Atu4465 - transcriptional regulator, at 1,607,759 to 1,608,526 Atu4465 Atu4466: Atu4466 - oxidoreductase, at 1,608,724 to 1,609,455 Atu4466 Atu4467: Atu4467 - hypothetical protein, at 1,609,511 to 1,609,684 Atu4467 Atu4468: Atu4468 - iron transport ABC transporter permease, at 1,609,891 to 1,610,745 Atu4468
Group Condition Atu4464 Atu4465 Atu4466 Atu4467 Atu4468
stress R2A with EDTA 0.25 mM N.D. -0.1 -0.3 N.D. -2.4
carbon source L-Fucose (C) N.D. +1.1 -3.9 N.D. +0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. -0.5 +0.0 N.D. -1.7
carbon source L-Fucose (C) N.D. +1.0 -3.1 N.D. +0.0
stress R2A with EDTA 0.25 mM N.D. +0.0 +0.4 N.D. -2.2
stress R2A with Lithium chloride 900 mM N.D. -0.1 +0.3 N.D. -1.8
stress R2A with Strontium chloride 750 mM N.D. +0.1 -0.1 N.D. -1.6
stress R2A with Calcium Chloride Dihydrate 87.5 mM N.D. +0.2 +0.0 N.D. -1.7
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. -0.2 +0.2 N.D. -1.4
stress R2A with molybdate 400 mM N.D. -0.2 +0.2 N.D. -1.3
stress R2A with Calcium Chloride Dihydrate 87.5 mM N.D. +0.3 +0.3 N.D. -1.9
stress R2A with Chloride 700 mM N.D. -0.0 +0.1 N.D. -1.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. -0.2 +0.4 N.D. -1.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant N.D. +0.0 +0.4 N.D. -1.5
lb LB N.D. -0.3 +0.3 N.D. -0.9
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. -0.8 -0.6 N.D. +0.3
stress R2A with Chlorate 400 mM N.D. -0.4 +0.3 N.D. -0.8
stress R2A with Strontium chloride 750 mM N.D. +0.2 +0.5 N.D. -1.6
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. -0.6 -0.6 N.D. +0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant N.D. +0.1 +0.3 N.D. -1.2
stress R2A with arsenate 50 mM N.D. -0.0 +0.6 N.D. -0.9
stress R2A with Ceftazidime 4 mM N.D. +0.1 +0.6 N.D. -1.0
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. +0.7 -0.6 N.D. -0.3
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. +0.7 -0.6 N.D. +0.2
carbon source L-Rhamnose (C) N.D. +1.5 -0.3 N.D. -0.1
carbon source D-(-)-lyxose (C) N.D. +1.5 -0.0 N.D. -0.3
carbon source L-Rhamnose (C) N.D. +1.6 -0.2 N.D. +0.1
stress R2A with m-arsenite 0.8 mM N.D. -0.1 +0.5 N.D. +1.2
carbon source D-(-)-lyxose (C) N.D. +1.4 +0.3 N.D. +0.1
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. +1.0 +0.5 N.D. +0.5
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