Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu4460 and Atu4461 are separated by 5 nucleotidesAtu4461 and Atu4462 overlap by 4 nucleotidesAtu4462 and Atu4464 are separated by 195 nucleotidesAtu4464 and Atu4465 are separated by 106 nucleotides Atu4460: Atu4460 - hypothetical protein, at 1,604,934 to 1,605,170 Atu4460 Atu4461: Atu4461 - hypothetical protein, at 1,605,176 to 1,605,463 Atu4461 Atu4462: Atu4462 - transcriptional regulator, at 1,605,460 to 1,606,491 Atu4462 Atu4464: Atu4464 - transaldolase B, at 1,606,687 to 1,607,652 Atu4464 Atu4465: Atu4465 - transcriptional regulator, at 1,607,759 to 1,608,526 Atu4465
Group Condition Atu4460 Atu4461 Atu4462 Atu4464 Atu4465
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. N.D. -0.8 N.D. -0.8
stress Chloramphenicol 12.5 ug/mL N.D. N.D. -0.7 N.D. -0.8
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. N.D. -1.0 N.D. -0.4
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. N.D. -0.8 N.D. -0.5
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. N.D. -0.5 N.D. -0.6
phage AgroPhage_E04 N.D. N.D. -0.3 N.D. -0.8
stress R2A with Chlorate 400 mM N.D. N.D. -0.6 N.D. -0.4
no phage P3L5 N.D. N.D. -0.3 N.D. -0.7
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. N.D. -0.1 N.D. -0.9
stress Dodecyl Sulfate 0.2 mM N.D. N.D. -0.6 N.D. -0.4
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. N.D. -0.6 N.D. -0.4
carbon source DL-glyceraldehyde (C) N.D. N.D. -0.3 N.D. -0.6
carbon source Cellotetraose (C) N.D. N.D. -0.5 N.D. -0.4
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. N.D. -0.9 N.D. +0.2
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. N.D. -0.9 N.D. +0.3
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. N.D. +0.3 N.D. -0.7
nitrogen source DL-2-Aminobutyric (N) N.D. N.D. -0.6 N.D. +0.4
stress R2A with Vancomycin 0.009 mM N.D. N.D. -0.6 N.D. +0.4
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. N.D. -0.7 N.D. +0.6
phage AgroPhage_F03 N.D. N.D. -0.5 N.D. +0.5
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. N.D. -0.4 N.D. +0.7
carbon source L-Fucose (C) N.D. N.D. -0.2 N.D. +1.0
carbon source L-Fucose (C) N.D. N.D. -0.2 N.D. +1.1
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. N.D. +0.3 N.D. +0.7
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. N.D. +0.1 N.D. +1.0
carbon source L-Rhamnose (C) N.D. N.D. -0.4 N.D. +1.5
carbon source L-Rhamnose (C) N.D. N.D. -0.3 N.D. +1.6
carbon source D-(-)-lyxose (C) N.D. N.D. -0.1 N.D. +1.4
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. N.D. +1.1 N.D. +0.4
carbon source D-(-)-lyxose (C) N.D. N.D. -0.0 N.D. +1.5
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