Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu4459 and Atu4460 are separated by 52 nucleotidesAtu4460 and Atu4461 are separated by 5 nucleotidesAtu4461 and Atu4462 overlap by 4 nucleotidesAtu4462 and Atu4464 are separated by 195 nucleotides Atu4459: Atu4459 - 6-O-methylguanine DNA methyltransferase, at 1,604,009 to 1,604,881 Atu4459 Atu4460: Atu4460 - hypothetical protein, at 1,604,934 to 1,605,170 Atu4460 Atu4461: Atu4461 - hypothetical protein, at 1,605,176 to 1,605,463 Atu4461 Atu4462: Atu4462 - transcriptional regulator, at 1,605,460 to 1,606,491 Atu4462 Atu4464: Atu4464 - transaldolase B, at 1,606,687 to 1,607,652 Atu4464
Group Condition Atu4459 Atu4460 Atu4461 Atu4462 Atu4464
phage AgroPhage_D04 -0.8 N.D. N.D. -0.4 N.D.
Atjh15 -0.7 N.D. N.D. -0.3 N.D.
carbon source D-Cellobiose (C) -0.2 N.D. N.D. -0.7 N.D.
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 N.D. N.D. -1.0 N.D.
stress R2A with Vancomycin 0.009 mM -0.3 N.D. N.D. -0.6 N.D.
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.4 N.D. N.D. -0.5 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.7 N.D. N.D. -0.1 N.D.
in planta Plant=Sorghum_NK_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.2 N.D. N.D. -0.6 N.D.
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.3 N.D. N.D. -0.5 N.D.
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.6 N.D. N.D. -0.2 N.D.
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 N.D. N.D. -0.8 N.D.
stress Chloramphenicol 12.5 ug/mL +0.1 N.D. N.D. -0.7 N.D.
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.2 N.D. N.D. -0.8 N.D.
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 N.D. N.D. -0.6 N.D.
stress R2A with Vancomycin 0.009 mM +0.3 N.D. N.D. -0.6 N.D.
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.2 N.D. N.D. -0.6 N.D.
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.6 N.D. N.D. -0.9 N.D.
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.6 N.D. N.D. -0.9 N.D.
stress Streptomycin 200 ug/mL +0.3 N.D. N.D. -0.6 N.D.
lb_sorghum x54 243 LB_Sorghum X54 243 +0.4 N.D. N.D. -0.6 N.D.
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.3 N.D. N.D. -0.5 N.D.
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.4 N.D. N.D. -0.5 N.D.
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.5 N.D. N.D. -0.6 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 N.D. N.D. -0.5 N.D.
stress syringaldehyde 0.5 mM +0.4 N.D. N.D. -0.4 N.D.
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.5 N.D. N.D. -0.5 N.D.
nitrogen source DL-2-Aminobutyric (N) +0.7 N.D. N.D. -0.6 N.D.
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.6 N.D. N.D. -0.5 N.D.
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.2 N.D. N.D. +1.1 N.D.
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +1.0 N.D. N.D. +0.0 N.D.
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