Fitness for 5 genes in Agrobacterium fabrum C58

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	Atu4451	Atu4452	Atu4453	Atu4454	Atu4456
carbon source	D-Mannitol (C)	-7.7	+0.2	-2.1	+0.1	-0.3
carbon source	D-Mannitol (C)	-8.2	+0.4	-1.7	-0.0	-0.2
carbon source	D-(-)-lyxose (C)	-3.0	-0.6	-0.3	-0.3	-0.0
carbon source	D-(-)-lyxose (C)	-3.0	-0.7	-0.2	-0.1	-0.1
stress	R2A with Vancomycin 0.009 mM	-2.9	-0.2	-0.2	-0.3	+0.1
carbon source	D-Arabinose (C)	-2.4	-0.1	-0.3	+0.0	-0.3
carbon source	D-Arabinose (C)	-2.1	-0.1	-0.5	-0.1	-0.2
carbon source	D-Galacturonic Acid (C)	-2.2	-0.2	-0.0	-0.0	-0.1
carbon source	D-Saccharic potassium salt (C)	-1.5	-0.7	-0.4	+0.1	+0.0
stress	R2A with Rifampicin 0.0007 mM	-2.6	+0.0	-0.0	+0.2	+0.1
in planta	Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	-1.1	-0.5	+0.0	+0.1	-0.6
stress	R2A with Vancomycin 0.009 mM	-3.1	+0.5	+0.0	+0.3	+0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-1.7	+0.5	-0.0	-0.3	-0.3
stress	R2A with m-arsenite 0.8 mM	-1.6	+0.5	-0.2	-0.1	-0.2
in planta	Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.5	-0.7	-0.1	+0.7	-0.9
phage	AgroPhage_C04	+0.2	-1.0	-0.1	-0.8	+0.5
phage	AgroPhage_E10	-0.6	-1.0	-0.2	+0.3	+0.3
stress	R2A with Rifampicin 0.0007 mM	-1.7	+0.3	+0.1	+0.4	-0.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.8	+0.7	+0.3	-0.4	-0.2
in planta	Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	-1.2	+0.7	-0.3	+0.1	+0.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-1.5	+0.1	-0.0	+0.5	+0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-1.4	+0.1	+0.2	+0.8	+0.0
in planta	Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-1.3	+1.2	-0.0	+0.3	+0.1
in planta	Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.8	+1.2	+0.6	-0.6	+0.1
in planta	Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.8	+0.7	+0.5	+0.1	+0.5
in planta	Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.5	+1.1	+0.3	+0.3	+0.3
carbon source	D-Sorbitol (C)	-1.7	+1.1	+2.8	+0.5	+0.2
carbon source	D-Sorbitol (C)	-1.4	+1.3	+3.1	+0.4	-0.4
carbon source	Xylitol (C)	+3.1	+1.0	-0.5	+0.1	-0.3
carbon source	Xylitol (C)	+2.9	+0.9	-0.4	+0.3	-0.1