Fitness for 5 genes in Agrobacterium fabrum C58

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	Atu4449	Atu4450	Atu4451	Atu4452	Atu4453
carbon source	D-Mannitol (C)	-4.4	-4.8	-8.2	+0.4	-1.7
carbon source	D-Mannitol (C)	-3.6	-4.3	-7.7	+0.2	-2.1
carbon source	D-(-)-lyxose (C)	-1.1	-0.9	-3.0	-0.7	-0.2
carbon source	D-(-)-lyxose (C)	-1.0	-0.7	-3.0	-0.6	-0.3
carbon source	D-Arabinose (C)	-0.9	-0.9	-2.4	-0.1	-0.3
carbon source	D-Arabinose (C)	-0.9	-0.8	-2.1	-0.1	-0.5
stress	R2A with Vancomycin 0.009 mM	+0.2	+0.0	-2.9	-0.2	-0.2
phage	AgroPhage_E10	-0.6	-0.6	-0.6	-1.0	-0.2
stress	R2A with Rifampicin 0.0007 mM	+0.2	-0.2	-2.6	+0.0	-0.0
carbon source	D-Saccharic potassium salt (C)	-0.2	+0.2	-1.5	-0.7	-0.4
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.2	-0.3	-1.3	-0.4	-0.2
carbon source	D-Galacturonic Acid (C)	+0.0	+0.0	-2.2	-0.2	-0.0
stress	R2A with Vancomycin 0.009 mM	-0.0	+0.2	-3.1	+0.5	+0.0
carbon source	D-Galacturonic Acid (C)	+0.0	+0.0	-2.1	-0.2	+0.1
stress	R2A with m-arsenite 0.8 mM	-0.3	+0.0	-1.6	+0.5	-0.2
stress	R2A with Rifampicin 0.0007 mM	-0.1	-0.1	-1.7	+0.3	+0.1
in planta	Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.8	-0.2	-0.9	+0.4	+0.2
in planta	Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.5	+0.7	-0.9	-0.3	-0.2
in planta	Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	-0.0	+0.1	-1.2	+0.7	-0.3
in planta	Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.3	+0.2	-1.0	+0.4	+0.3
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.3	-0.1	-1.2	+0.5	+0.2
in planta	Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.2	-0.2	-1.3	+1.2	-0.0
in planta	Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.2	+0.3	-0.8	+0.7	+0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.4	+0.1	-0.8	+0.7	+0.3
in planta	Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.4	-0.3	-0.8	+1.2	+0.6
carbon source	Maltitol (C)	+1.0	+0.7	+0.0	+0.1	+0.4
carbon source	Xylitol (C)	-0.4	-0.4	+2.9	+0.9	-0.4
carbon source	Xylitol (C)	-0.2	-0.5	+3.1	+1.0	-0.5
carbon source	D-Sorbitol (C)	+2.1	+2.3	-1.7	+1.1	+2.8
carbon source	D-Sorbitol (C)	+2.6	+2.4	-1.4	+1.3	+3.1