Fitness for 5 genes in Agrobacterium fabrum C58

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	Atu4447	Atu4448	Atu4449	Atu4450	Atu4451
carbon source	D-Mannitol (C)	-4.8	-4.1	-4.4	-4.8	-8.2
carbon source	D-Mannitol (C)	-4.9	-4.3	-3.6	-4.3	-7.7
carbon source	D-(-)-lyxose (C)	-0.7	-1.0	-1.1	-0.9	-3.0
carbon source	D-(-)-lyxose (C)	-0.8	-1.1	-1.0	-0.7	-3.0
carbon source	D-Arabinose (C)	-0.7	-1.3	-0.9	-0.9	-2.4
carbon source	D-Arabinose (C)	-0.7	-0.8	-0.9	-0.8	-2.1
stress	R2A with Vancomycin 0.009 mM	-0.2	+0.0	-0.0	+0.2	-3.1
stress	R2A with Rifampicin 0.0007 mM	-0.0	-0.2	+0.2	-0.2	-2.6
stress	R2A with Vancomycin 0.009 mM	+0.2	+0.0	+0.2	+0.0	-2.9
in planta	Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.1	-0.3	-0.8	-0.2	-0.9
carbon source	D-Galacturonic Acid (C)	+0.1	-0.1	+0.0	+0.0	-2.2
phage	AgroPhage_E10	+0.1	-0.4	-0.6	-0.6	-0.6
stress	R2A with m-arsenite 0.8 mM	+0.1	-0.2	-0.3	+0.0	-1.6
carbon source	D-Galacturonic Acid (C)	-0.0	+0.1	+0.0	+0.0	-2.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.2	-0.3	-0.1	-0.1	-1.5
in planta	Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.5	+0.2	+0.2	-0.2	-1.3
in planta	Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.3	-0.4	-0.3	+0.2	-1.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.3	-0.2	+0.2	+0.0	-1.4
in planta	Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.5	+0.5	+0.3	-0.1	-1.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.0	+0.3	+0.1	+0.3	-1.5
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	+0.1	+0.8	-0.5	-0.3	-0.8
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.1	+0.7	-0.1	-0.5	-0.9
in planta	Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.1	+0.4	-0.5	+0.7	-0.9
in planta	Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.2	-0.3	+0.6	+0.4	-0.8
carbon source	Xylitol (C)	-0.4	-0.7	-0.4	-0.4	+2.9
carbon source	Xylitol (C)	-0.5	-0.6	-0.2	-0.5	+3.1
carbon source	Maltitol (C)	+0.9	+0.8	+0.9	+0.8	-0.1
carbon source	Maltitol (C)	+1.0	+0.9	+1.0	+0.7	+0.0
carbon source	D-Sorbitol (C)	+2.8	+2.4	+2.1	+2.3	-1.7
carbon source	D-Sorbitol (C)	+2.9	+2.3	+2.6	+2.4	-1.4