Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu4441 and Atu4442 are separated by 114 nucleotidesAtu4442 and Atu4443 are separated by 71 nucleotidesAtu4443 and Atu4444 are separated by 213 nucleotidesAtu4444 and Atu4445 are separated by 48 nucleotides Atu4441: Atu4441 - amidase, at 1,585,223 to 1,586,620 Atu4441 Atu4442: Atu4442 - hypothetical protein, at 1,586,735 to 1,587,283 Atu4442 Atu4443: Atu4443 - hypothetical protein, at 1,587,355 to 1,587,705 Atu4443 Atu4444: Atu4444 - hippurate hydrolase, at 1,587,919 to 1,589,043 Atu4444 Atu4445: Atu4445 - ABC transporter permease, at 1,589,092 to 1,590,942 Atu4445
Group Condition Atu4441 Atu4442 Atu4443 Atu4444 Atu4445
phage AgroPhage_A07 -0.7 -0.3 -0.2 -0.2 -0.3
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.4 -0.7 -0.8 -0.1 -0.4
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.0 -0.4 -0.4 +0.3 -0.5
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.3 -0.4 -0.4 -0.2 +0.3
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.2 -0.6 -0.1 +0.4 -0.5
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days -0.2 +0.4 -0.6 -0.4 +0.2
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 -0.7 -0.3 +0.5 -0.1
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days +0.1 -0.2 -0.6 -0.3 +0.6
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.2 -0.2 -0.7 -0.1 +0.8
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.3 -0.2 -0.4 +0.5 +0.1
phage AgroPhage_B07 -0.4 +0.1 -0.4 +0.2 +0.3
Atjh14 -0.7 +0.2 +0.5 -0.4 +0.3
carbon source L-ascorbate (C) +0.2 +0.7 -0.1 -0.5 -0.5
phage AgroPhage_C04 +0.3 -0.3 -0.5 +0.5 -0.0
phage AgroPhage_D10 +0.3 -0.1 -0.7 +0.2 +0.3
phage AgroPhage_E10 -0.2 +0.1 -0.5 -0.0 +0.6
Atjh10 -0.0 -0.8 +0.2 +0.2 +0.5
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 -0.2 -0.7 +0.3 +0.6
stress R2A with Vancomycin 0.009 mM -0.4 -0.6 +0.3 +0.6 +0.3
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 -0.1 -0.5 +0.3 +0.5
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 -0.0 -0.5 +0.2 +0.5
phage AgroPhage_F04 -0.2 +0.7 -0.4 -0.1 +0.4
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.8 +0.1 -0.6 +0.2 +0.2
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.5 +0.4 +0.2 -0.4 +0.2
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.3 +0.8 -0.1 +0.2 +0.3
phage AgroPhage_C10 +0.3 -0.0 -0.3 +0.8 +0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.1 +0.7 +0.1 +0.4 -0.1
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +0.4 +0.4 +0.3 -0.1
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.1 +0.3 +0.5 +0.4 +0.4
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.3 +0.5 +0.5 +0.6 +0.4
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