Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu4434 and Atu4435 overlap by 4 nucleotidesAtu4435 and Atu4436 are separated by 99 nucleotidesAtu4436 and Atu4437 are separated by 350 nucleotidesAtu4437 and Atu4438 are separated by 209 nucleotides Atu4434: Atu4434 - oligopeptide ABC transporter ATPase, at 1,577,489 to 1,578,325 Atu4434 Atu4435: Atu4435 - oligopeptide ABC transporter ATPase, at 1,578,322 to 1,579,071 Atu4435 Atu4436: Atu4436 - IS5 family transposase, at 1,579,171 to 1,580,208 Atu4436 Atu4437: Atu4437 - LysR family transcriptional regulator, at 1,580,559 to 1,581,461 Atu4437 Atu4438: Atu4438 - oligopeptide ABC transporter substrate-binding protein, at 1,581,671 to 1,583,206 Atu4438
Group Condition Atu4434 Atu4435 Atu4436 Atu4437 Atu4438
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.4 -1.1 -0.2 -0.4 N.D.
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days -0.5 -1.0 +0.1 -0.6 N.D.
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days -0.7 -1.0 -0.2 +0.1 N.D.
in planta Plant=Arabidopsis_efr; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days -0.4 -0.6 -0.4 -0.3 N.D.
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.6 -0.1 +0.0 -0.8 N.D.
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.6 -0.8 +0.3 -0.3 N.D.
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 -0.9 +0.4 -0.8 N.D.
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.4 -1.4 +0.0 +0.3 N.D.
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.7 +0.0 +0.1 -0.7 N.D.
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.6 -0.5 +0.3 -0.4 N.D.
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.4 -1.2 -0.1 -0.2 N.D.
phage AgroPhage_D04 +0.3 -0.1 +0.2 -1.4 N.D.
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.4 -0.5 +0.3 -0.4 N.D.
phage AgroPhage_C10 -0.3 -0.8 -0.5 +0.6 N.D.
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.4 -0.7 -0.1 +0.3 N.D.
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.6 -0.8 +0.2 +0.3 N.D.
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days -0.4 -0.9 +0.2 +0.3 N.D.
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.5 -0.9 +0.0 +0.6 N.D.
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.5 -0.2 +0.5 -0.5 N.D.
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.8 +0.2 +0.4 -0.4 N.D.
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.3 -1.2 +0.4 +0.7 N.D.
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.7 -0.3 +0.4 +0.2 N.D.
phage AgroPhage_D10 -1.0 +0.6 +0.2 +0.2 N.D.
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.4 -0.4 +0.2 +0.6 N.D.
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.0 -0.8 +0.7 +0.1 N.D.
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.7 -0.2 +0.4 +0.5 N.D.
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.5 -0.3 +0.3 +0.5 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.3 +1.0 -0.2 -0.3 N.D.
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.2 -0.6 +0.1 +0.8 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.5 +1.0 -0.0 +0.5 N.D.
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