Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu4426 and Atu4427 are separated by 51 nucleotidesAtu4427 and Atu4428 are separated by 216 nucleotidesAtu4428 and Atu4429 are separated by 173 nucleotidesAtu4429 and Atu4430 are separated by 205 nucleotides Atu4426: Atu4426 - adenine deaminase, at 1,567,670 to 1,569,463 Atu4426 Atu4427: Atu4427 - replicative DNA helicase, at 1,569,515 to 1,570,216 Atu4427 Atu4428: Atu4428 - amidohydrolase, at 1,570,433 to 1,571,644 Atu4428 Atu4429: Atu4429 - phosphoribosyltransferase, at 1,571,818 to 1,572,525 Atu4429 Atu4430: Atu4430 - dipeptidase, at 1,572,731 to 1,573,786 Atu4430
Group Condition Atu4426 Atu4427 Atu4428 Atu4429 Atu4430
stress R2A with m-arsenite 0.8 mM -1.5 +0.2 -0.4 -0.1 +0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.2 -0.4 -0.4 -0.4 -0.1
stress R2A with Tetracycline 0.002 mM -0.3 -0.3 -0.5 -0.3 +0.1
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 -0.4 -0.4 -0.6 +0.0
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 -0.2 -0.4 -0.2 -0.4
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.0 -0.4 +0.4 -0.4 -0.6
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.3 +0.4 -0.4 -0.3 -0.2
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.1 -0.7 +0.3 -0.3 -0.1
phage AgroPhage_D10 +0.0 -1.2 +0.2 +0.1 +0.2
stress R2A with m-arsenite 0.8 mM -1.1 +0.1 -0.0 -0.1 +0.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.1 -0.5 +0.1 +0.5 -0.4
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 +0.4 +0.0 -0.6 -0.2
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 +0.3 +0.5 -0.8 -0.2
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.2 -0.4 +0.6 +0.2 -0.2
phage AgroPhage_E10 +0.1 -1.2 +0.5 +0.8 -0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.1 -0.3 +1.0 -0.0 -0.6
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 +0.2 +0.5 -0.4 -0.3
phage AgroPhage_B07 +0.1 -0.6 +0.3 +0.2 +0.1
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.3 +0.4 +0.3 -0.3 -0.0
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 +0.5 +0.3 +0.1 -0.6
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 +0.3 +0.6 -0.1 -0.7
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -0.1 -0.4 +0.6 +0.2 +0.2
phage AgroPhage_E04 +0.3 -0.8 +0.4 +0.5 +0.2
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 +0.1 -0.0 +0.8 -0.4
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 +0.3 +0.5 -0.3 +0.2
nitrogen source DL-2-Aminobutyric (N) -0.3 +0.2 +0.6 -0.1 +0.5
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +0.2 +0.3 +0.4 -0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.1 +0.9 +0.3 -0.2 -0.0
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.2 -0.1 +0.9 +0.0 +0.3
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.3 +0.6 +0.5 -0.2 +0.8
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