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Protein
Homologs
Fitness for 5 genes in
Agrobacterium fabrum C58
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Atu4426 and Atu4427 are separated by 51 nucleotides
Atu4427 and Atu4428 are separated by 216 nucleotides
Atu4428 and Atu4429 are separated by 173 nucleotides
Atu4429 and Atu4430 are separated by 205 nucleotides
Atu4426: Atu4426 - adenine deaminase, at 1,567,670 to 1,569,463
Atu4426
Atu4427: Atu4427 - replicative DNA helicase, at 1,569,515 to 1,570,216
Atu4427
Atu4428: Atu4428 - amidohydrolase, at 1,570,433 to 1,571,644
Atu4428
Atu4429: Atu4429 - phosphoribosyltransferase, at 1,571,818 to 1,572,525
Atu4429
Atu4430: Atu4430 - dipeptidase, at 1,572,731 to 1,573,786
Atu4430
Group
Condition
Atu4426
Atu4427
Atu4428
Atu4429
Atu4430
stress
R2A with m-arsenite 0.8 mM
-1.5
+0.2
-0.4
-0.1
+0.1
in planta
Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
-0.2
-0.4
-0.4
-0.4
-0.1
stress
R2A with Tetracycline 0.002 mM
-0.3
-0.3
-0.5
-0.3
+0.1
in planta
Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.2
-0.4
-0.4
-0.6
+0.0
in planta
Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
+0.1
-0.2
-0.4
-0.2
-0.4
in planta
Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.0
-0.4
+0.4
-0.4
-0.6
in planta
Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
-0.3
+0.4
-0.4
-0.3
-0.2
in planta
Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
-0.1
-0.7
+0.3
-0.3
-0.1
phage
AgroPhage_D10
+0.0
-1.2
+0.2
+0.1
+0.2
stress
R2A with m-arsenite 0.8 mM
-1.1
+0.1
-0.0
-0.1
+0.5
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.1
-0.5
+0.1
+0.5
-0.4
in planta
Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.2
+0.4
+0.0
-0.6
-0.2
in planta
Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.1
+0.3
+0.5
-0.8
-0.2
in planta
Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
-0.2
-0.4
+0.6
+0.2
-0.2
phage
AgroPhage_E10
+0.1
-1.2
+0.5
+0.8
-0.2
in planta
Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
-0.1
-0.3
+1.0
-0.0
-0.6
in planta
Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.1
+0.2
+0.5
-0.4
-0.3
phage
AgroPhage_B07
+0.1
-0.6
+0.3
+0.2
+0.1
in planta
Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
-0.3
+0.4
+0.3
-0.3
-0.0
in planta
Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
-0.1
+0.5
+0.3
+0.1
-0.6
in planta
Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.2
+0.3
+0.6
-0.1
-0.7
in planta
Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days
-0.1
-0.4
+0.6
+0.2
+0.2
phage
AgroPhage_E04
+0.3
-0.8
+0.4
+0.5
+0.2
in planta
Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.2
+0.1
-0.0
+0.8
-0.4
in planta
Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.1
+0.3
+0.5
-0.3
+0.2
nitrogen source
DL-2-Aminobutyric (N)
-0.3
+0.2
+0.6
-0.1
+0.5
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.4
+0.2
+0.3
+0.4
-0.2
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.1
+0.9
+0.3
-0.2
-0.0
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.2
-0.1
+0.9
+0.0
+0.3
in planta
Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
+0.3
+0.6
+0.5
-0.2
+0.8
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