Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu4411 and Atu4412 are separated by 370 nucleotidesAtu4412 and Atu4413 are separated by 110 nucleotidesAtu4413 and Atu4414 are separated by 2 nucleotidesAtu4414 and Atu4415 are separated by 316 nucleotides Atu4411: Atu4411 - LysR family transcriptional regulator, at 1,546,039 to 1,546,902 Atu4411 Atu4412: Atu4412 - rhizobiocin/RTX toxin, at 1,547,273 to 1,553,086 Atu4412 Atu4413: Atu4413 - bacteriocin ABC transporter ATPase, at 1,553,197 to 1,554,948 Atu4413 Atu4414: Atu4414 - bacteriocin ABC transporter permease, at 1,554,951 to 1,556,255 Atu4414 Atu4415: Atu4415 - hypothetical protein, at 1,556,572 to 1,558,485 Atu4415
Group Condition Atu4411 Atu4412 Atu4413 Atu4414 Atu4415
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.9 -0.3 -0.1 -0.4 +0.2
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.7 -0.2 -0.6 +0.0 -0.0
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -0.3 -0.2 -0.1 -0.5 -0.4
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.3 -0.1 -0.6 -0.2 -0.1
phage Phage 95.3 + bacteria -0.4 -0.2 -0.1 -0.6 -0.0
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.2 -0.2 -0.4 -0.4 -0.1
lb_sorghum_leaf LB_sorghum_leaf -0.5 -0.3 -0.2 -0.2 -0.1
lb_sorghum_leaf LB_sorghum_leaf -0.3 -0.2 -0.3 -0.2 -0.2
stress Nerol 1.25 mM -0.3 -0.1 +0.0 -0.4 -0.4
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.6 +0.1 -0.4 -0.2 +0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.3 -0.1 -0.5 -0.7 +0.3
phage AgroPhage_F10 -0.6 +0.1 -0.2 -0.2 +0.2
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.7 -0.1 +0.2 -0.3 +0.3
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.6 -0.1 -0.1 +0.2 +0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.2 +0.2 -0.1 -0.3 -0.4
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.6 -0.1 +0.3 -0.1 +0.3
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.7 +0.1 +0.0 +0.2 +0.3
phage AgroPhage_C04 -0.6 +0.0 +0.1 +0.3 -0.0
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.2 -0.2 +0.2 -0.7 +0.3
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.3 +0.2 +0.2 +0.3 -0.4
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 -0.2 -0.3 +0.5 +0.1
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.3 -0.0 -0.2 +0.1 +0.6
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.3 -0.1 -0.2 +0.3 +0.4
phage AgroPhage_H03 -0.4 +0.2 +0.4 +0.3 +0.0
phage AgroPhage_E10 +0.5 +0.0 -0.0 +0.6 -0.5
nitrogen source DL-2-Aminobutyric (N) -0.4 +0.2 +0.2 +0.9 -0.4
no phage P4L5 -0.2 +0.0 +0.3 +0.2 +0.4
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.4 -0.2 +0.1 -0.1 +0.5
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.5 -0.0 +0.1 -0.4 +0.7
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.2 -0.0 +0.2 +0.4 +0.4
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