Fitness for 5 genes in Agrobacterium fabrum C58

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 1014 experiments or choose conditions or try the comparative fitness browser

500 ntAtu4395 and Atu4396 are separated by 149 nucleotidesAtu4396 and Atu4397 overlap by 10 nucleotidesAtu4397 and Atu4398 are separated by 5 nucleotidesAtu4398 and Atu4399 overlap by 4 nucleotides Atu4395: Atu4395 - hypothetical protein, at 1,531,871 to 1,532,221 Atu4395 Atu4396: Atu4396 - hypothetical protein, at 1,532,371 to 1,532,886 Atu4396 Atu4397: Atu4397 - protease, at 1,532,877 to 1,533,854 Atu4397 Atu4398: Atu4398 - hypothetical protein, at 1,533,860 to 1,534,798 Atu4398 Atu4399: Atu4399 - hypothetical protein, at 1,534,795 to 1,535,172 Atu4399
Group Condition Atu4395 Atu4396 Atu4397 Atu4398 Atu4399
lb_sorghum_leaf LB_sorghum_leaf -0.7 -0.5 -0.3 -0.6 -0.5
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 -0.4 -0.7 -0.4 -0.3
stress R2A with tungstate 375 mM -0.3 -0.0 -0.1 -0.5 -0.6
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.6 -0.5 -0.1 -0.0 -0.3
in planta Plant=Arabidopsis_efr; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days -0.2 -0.1 -0.3 -0.3 -0.6
lb_sorghum_leaf LB_sorghum_leaf -0.2 -0.2 -0.5 -0.4 -0.1
lb_sorghum_leaf LB_sorghum_leaf -0.4 -0.3 -0.4 +0.0 -0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.8 -0.4 -0.2 -0.1 +0.4
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.5 -0.3 +0.2 +0.1 -0.5
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.5 -0.5 -0.2 -0.5 -0.1
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.9 +0.4 -0.2 -0.1 -0.0
phage AgroPhage_A07 -0.4 +0.2 -0.0 +0.1 -0.6
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.1 -0.6 +0.2 -0.4 +0.1
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.4 -0.7 +0.4 -0.7 +0.2
phage AgroPhage_E10 +0.4 -0.6 +0.3 -0.2 -0.4
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days +0.3 -0.6 -0.0 -0.3 +0.1
nitrogen source DL-2-Aminobutyric (N) +0.5 -0.6 +0.0 -0.3 -0.1
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.2 -0.0 -0.4 +0.8 -0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.5 -0.2 +0.3 -0.2 -0.3
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.4 +0.4 +0.1 +0.3 -0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.0 +0.6 +0.1 +0.2 -0.4
Atjh2 -0.0 +0.4 +0.3 -0.5 +0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.2 +0.7 +0.1 -0.1 -0.3
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.4 +0.8 +0.1 -0.3 +0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.1 -0.4 +0.1 +0.3 +0.6
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.1 +0.4 -0.1 +0.9 +0.1
phage phage 100.2 -0.1 +0.2 +0.3 +0.5 +0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.2 -0.3 +0.3 +0.1 +0.9
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.8 +0.1 -0.1 +0.2 +0.2
phage phage 100.3 +0.5 +0.5 +0.2 +0.6 +0.3
remove
Atu4395
plot		 remove
Atu4396
plot		 remove
Atu4397		 remove
Atu4398
plot		 remove
Atu4399
plot