Fitness for 5 genes in Agrobacterium fabrum C58

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	Atu4387	Atu4388	Atu4389	Atu8197	Atu4391
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.5	-0.4	+0.4	-1.1	-0.7
in planta	Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.2	-0.1	-0.4	-1.0	-0.7
in planta	Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	-0.3	-0.2	-0.4	-0.5	-0.8
in planta	Plant=Arabidopsis_col0; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days	-0.4	-0.2	-0.6	-0.2	-0.6
in planta	Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.4	-0.1	-0.6	-0.8	+0.0
in planta	Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	-0.4	-0.2	-0.7	-0.1	-0.4
in planta	Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days	-0.5	-0.2	-0.2	-0.6	-0.3
lb_sorghum_leaf	LB_sorghum_leaf	-0.6	-0.3	-0.2	-0.3	-0.2
in planta	Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days	-0.1	-0.2	-0.4	-0.1	-0.9
in planta	Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.6	-0.3	-0.2	+0.1	-0.5
phage	AgroPhage_E04	-0.3	+0.1	-1.1	-0.8	+0.6
nitrogen source	DL-2-Aminobutyric (N)	-0.6	-0.3	+0.7	-0.6	-0.1
in planta	Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.3	-0.3	-0.7	-0.2	+0.4
in planta	Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.3	+0.3	-0.4	-0.1	-1.0
r2a_control	R2A control	-0.4	+0.0	-0.1	+0.4	-0.8
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	-0.3	-0.1	-0.5	-0.2	+0.6
in planta	Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.1	-0.5	+0.7	-0.1	-0.6
phage	AgroPhage_D10	-0.3	-0.1	+0.5	-0.5	+0.3
phage	AgroPhage_F04	+0.5	-0.2	-0.6	+0.0	+0.5
in planta	Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.2	-0.3	+0.0	+0.8	-0.5
in planta	Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.5	+0.1	+0.2	+0.5	-0.5
in planta	Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.2	-0.3	+0.6	-0.4	+0.9
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.3	-0.0	+0.1	+0.6	+0.8
carbon source	L-Xylose (C)	-0.2	+0.1	+0.3	-0.1	+1.0
carbon source	D-Saccharic potassium salt (C)	+0.3	-0.0	+0.3	-0.2	+0.9
in planta	Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.1	+0.1	+0.2	+1.3	-0.4
in planta	Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.1	+0.0	-0.2	+1.0	+0.7
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.3	+0.0	+0.2	-0.4	+1.4
carbon source	Dextrin from potato starch (C)	-0.1	+0.1	+0.3	+0.2	+1.0
in planta	Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.5	-0.1	+0.4	+0.0	+1.1