Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu4382 and Atu4383 are separated by 236 nucleotidesAtu4383 and Atu4384 are separated by 83 nucleotidesAtu4384 and Atu4385 are separated by 78 nucleotidesAtu4385 and Atu4386 overlap by 1 nucleotides Atu4382: Atu4382 - nitrite reductase, at 1,519,291 to 1,520,433 Atu4382 Atu4383: Atu4383 - hypothetical protein, at 1,520,670 to 1,521,902 Atu4383 Atu4384: Atu4384 - hypothetical protein, at 1,521,986 to 1,522,519 Atu4384 Atu4385: Atu4385 - hypothetical protein, at 1,522,598 to 1,523,047 Atu4385 Atu4386: Atu4386 - nitric oxide reductase NorD protein, at 1,523,047 to 1,524,945 Atu4386
Group Condition Atu4382 Atu4383 Atu4384 Atu4385 Atu4386
lb_sorghum_leaf LB_sorghum_leaf -0.2 -0.2 -0.6 -0.6 -0.4
lb_sorghum_leaf LB_sorghum_leaf -0.2 -0.6 -0.4 -0.3 -0.3
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days -0.3 -0.7 -0.4 -0.1 -0.4
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 -0.4 -0.1 -0.6 -0.3
lb_sorghum_leaf LB_sorghum_leaf -0.2 -0.5 -0.5 -0.2 -0.2
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.5 -0.9 -0.5 +0.4 +0.0
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days +0.1 -0.6 -0.3 -0.3 -0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.1 -0.5 -0.1 -0.6 +0.1
phage AgroPhage_D10 -0.1 -1.1 -0.2 +0.1 +0.2
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 -0.3 -0.5 -0.4 +0.1
phage AgroPhage_C04 -0.0 -1.2 +0.3 -0.3 +0.2
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -0.2 -0.8 -0.0 +0.3 -0.0
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.3 -0.2 -0.1 +0.3 -0.3
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 +0.4 -0.5 -0.2 -0.4
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 -0.4 -0.2 -0.5 +0.2
phage phage 95.1 -0.0 +0.3 -0.5 -0.6 +0.2
phage AgroPhage_F10 -0.0 -0.7 -0.1 +0.3 +0.2
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.3 +0.4 +0.2 -0.6 -0.0
phage AgroPhage_E04 -0.3 -0.3 -0.3 +0.4 +0.1
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 +0.5 -0.3 -1.1 +0.4
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 +0.7 -0.2 -0.5 -0.4
nitrogen source DL-2-Aminobutyric (N) -0.1 +0.9 -0.3 -1.0 +0.3
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 -0.3 -0.2 +0.6 -0.1
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.3 -0.3 +0.5 +0.2 -0.3
phage AgroPhage_E10 +0.3 +0.2 -0.5 +0.4 +0.2
phage AgroPhage_C10 +0.2 +0.8 -0.2 +0.1 -0.2
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 +0.5 -0.2 +0.4 -0.1
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.2 +0.7 -0.0 -0.1 +0.4
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.3 +0.1 -0.0 +0.9 -0.2
phage phage 100.2 +0.1 -0.1 +0.4 +0.3 +0.5
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