Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu4368 and Atu4369 are separated by 298 nucleotidesAtu4369 and Atu4370 are separated by 103 nucleotidesAtu4370 and Atu4371 overlap by 4 nucleotidesAtu4371 and Atu4372 are separated by 1 nucleotides Atu4368: Atu4368 - hypothetical protein, at 1,504,990 to 1,505,385 Atu4368 Atu4369: Atu4369 - sugar ABC transporter substrate-binding protein, at 1,505,684 to 1,506,706 Atu4369 Atu4370: Atu4370 - sugar ABC transporter ATPase, at 1,506,810 to 1,508,303 Atu4370 Atu4371: Atu4371 - sugar ABC transporter permease, at 1,508,300 to 1,509,244 Atu4371 Atu4372: Atu4372 - ribose ABC transporter permease, at 1,509,246 to 1,510,214 Atu4372
Group Condition Atu4368 Atu4369 Atu4370 Atu4371 Atu4372
carbon source Methyl beta-D-glucopyranoside (C) +0.1 -3.9 -3.3 -3.0 -3.1
carbon source Methyl beta-D-glucopyranoside (C) -0.1 -2.9 -3.2 -2.9 -3.7
carbon source Cellohexaose (C) +0.1 -1.6 -1.9 -2.3 -2.1
carbon source Cellohexaose (C) -0.1 -1.8 -1.8 -1.9 -1.7
carbon source Cellopentaose (C) +0.1 -1.7 -1.4 -1.7 -1.6
carbon source Cellopentaose (C) +0.1 -1.5 -1.5 -1.6 -1.6
carbon source Cellotetraose (C) +0.1 -1.4 -1.4 -1.5 -1.5
carbon source Cellotetraose (C) -0.1 -1.1 -1.5 -1.3 -1.3
carbon source methyl 3-keto-a-D-glucopyranoside (C) -0.0 -1.4 -1.2 -0.8 -1.4
carbon source methyl 3-keto-a-D-glucopyranoside (C) +0.0 -1.5 -1.2 -1.1 -0.9
carbon source Methyl alpha-D-glucopyranoside (C) -0.1 -0.9 -1.2 -0.7 -1.0
carbon source Methyl alpha-D-glucopyranoside (C) -0.1 -0.8 -0.9 -0.6 -1.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.4 -0.8 -0.4 -0.5 -0.4
carbon source Maltitol (C) +0.1 -0.7 -0.6 -0.3 -0.6
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days -0.3 -0.2 -0.5 -0.7 -0.4
carbon source Gentibiose (C) +0.1 -0.6 -0.5 -0.4 -0.6
carbon source Gentibiose (C) +0.1 -0.4 -0.4 -0.5 -0.6
lb_sorghum_leaf LB_sorghum_leaf -0.4 -0.4 -0.4 -0.3 -0.5
carbon source Methyl alpha-D-glucopyranoside (C) +0.1 -0.5 -0.4 -0.4 -0.5
in planta Plant=Arabidopsis_efr; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days -0.5 -0.2 -0.4 -0.4 -0.3
carbon source Maltitol (C) +0.2 -0.4 -0.5 -0.3 -0.5
carbon source Methyl alpha-D-glucopyranoside (C) +0.1 -0.5 -0.4 -0.3 -0.4
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 -0.3 +0.2 -0.4 -0.7
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.0 +0.5 -0.5 -0.5 -0.4
stress Chloramphenicol 12.5 ug/mL +0.1 -0.8 -0.1 +0.5 -0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.5 +0.3 -0.4 -0.5 +0.6
stress R2A with Vancomycin 0.009 mM -0.1 -0.4 -0.5 +0.4 +0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.6 +0.3 +0.0 -0.6 -0.4
phage AgroPhage_C04 +0.2 +0.3 -0.6 -0.1 +0.5
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.2 +0.3 -0.1 +0.7 -0.4
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