Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu4363 and Atu4364 are separated by 138 nucleotidesAtu4364 and Atu4365 overlap by 11 nucleotidesAtu4365 and Atu4366 are separated by 175 nucleotidesAtu4366 and Atu4367 are separated by 136 nucleotides Atu4363: Atu4363 - hypothetical protein, at 1,499,832 to 1,500,866 Atu4363 Atu4364: Atu4364 - LacI family transcriptional regulator, at 1,501,005 to 1,502,069 Atu4364 Atu4365: Atu4365 - hypothetical protein, at 1,502,059 to 1,502,934 Atu4365 Atu4366: Atu4366 - short chain dehydrogenase, at 1,503,110 to 1,503,883 Atu4366 Atu4367: Atu4367 - LysR family transcriptional regulator, at 1,504,020 to 1,504,919 Atu4367
Group Condition Atu4363 Atu4364 Atu4365 Atu4366 Atu4367
carbon source D-Galacturonic Acid (C) +0.0 -3.5 +0.1 -0.1 -0.1
carbon source D-Galacturonic Acid (C) +0.1 -3.4 +0.1 +0.1 -0.1
carbon source D-Saccharic potassium salt (C) -0.3 -2.2 -0.1 -0.1 -0.0
carbon source D-Saccharic potassium salt (C) +0.1 -2.3 +0.1 -0.1 -0.1
carbon source L-ascorbate (C) +0.2 -2.1 +0.1 -0.3 -0.2
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.6 -0.6 -0.3 -0.9 +0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.2 -0.6 -0.4 -0.5 -0.5
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -0.1 -0.7 -0.2 -0.7 -0.3
carbon source D-(-)-lyxose (C) +0.1 -2.0 +0.1 -0.0 -0.2
carbon source NAG (C) +0.0 -1.8 +0.1 -0.1 -0.2
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.5 -1.0 +0.1 -0.4 +0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.7 -0.7 +0.0 -0.4 +0.2
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.8 +0.2 -0.3 -0.9 +0.2
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.1 -1.4 -0.2 -0.4 +0.3
carbon source L-Sorbose (C) +0.0 -1.8 +0.1 +0.1 +0.1
carbon source 4-Aminobutyric (C) -0.5 -1.2 +0.1 +0.2 +0.1
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.7 -1.4 -0.2 -0.5 +0.0
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 -0.7 -0.2 -0.9 +0.3
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.5 -0.3 -0.2 -1.0 -0.0
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.3 -1.3 -0.1 -0.2 +0.2
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.4 -0.9 -0.2 +0.1 +0.5
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.6 -0.7 +0.1 +0.4 +0.2
stress Chloramphenicol 12.5 ug/mL +0.5 +0.0 -0.0 -1.2 +0.2
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.2 -0.7 -0.4 +0.6 +0.4
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.8 -1.2 +0.2 +0.4 +0.1
stress R2A with tungstate 375 mM -0.8 +0.2 +0.0 +1.2 +0.2
carbon source D-Leucrose (C) +0.3 +1.4 +0.0 -0.4 -0.0
carbon source D-Leucrose (C) +0.2 +1.4 -0.1 -0.3 +0.1
carbon source methyl-alpha-D-xylopyranoside (C) -1.9 +13.4 -0.2 +0.4 -0.2
carbon source methyl-alpha-D-xylopyranoside (C) -1.3 +13.7 -0.1 -0.2 -0.1
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