Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu4362 and Atu4363 are separated by 12 nucleotidesAtu4363 and Atu4364 are separated by 138 nucleotidesAtu4364 and Atu4365 overlap by 11 nucleotidesAtu4365 and Atu4366 are separated by 175 nucleotides Atu4362: Atu4362 - hypothetical protein, at 1,498,917 to 1,499,819 Atu4362 Atu4363: Atu4363 - hypothetical protein, at 1,499,832 to 1,500,866 Atu4363 Atu4364: Atu4364 - LacI family transcriptional regulator, at 1,501,005 to 1,502,069 Atu4364 Atu4365: Atu4365 - hypothetical protein, at 1,502,059 to 1,502,934 Atu4365 Atu4366: Atu4366 - short chain dehydrogenase, at 1,503,110 to 1,503,883 Atu4366
Group Condition Atu4362 Atu4363 Atu4364 Atu4365 Atu4366
carbon source D-Galacturonic Acid (C) +0.1 +0.0 -3.5 +0.1 -0.1
carbon source D-Galacturonic Acid (C) +0.0 +0.1 -3.4 +0.1 +0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -1.1 -0.7 -0.7 +0.0 -0.4
carbon source D-Saccharic potassium salt (C) -0.0 -0.3 -2.2 -0.1 -0.1
carbon source D-Saccharic potassium salt (C) -0.2 +0.1 -2.3 +0.1 -0.1
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.0 -0.6 -0.6 -0.3 -0.9
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -0.7 -0.6 -0.6 -0.2 -0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -0.3 -0.1 -0.7 -0.2 -0.7
carbon source L-ascorbate (C) +0.0 +0.2 -2.1 +0.1 -0.3
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.2 -0.5 -1.0 +0.1 -0.4
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.4 +0.7 -1.4 -0.2 -0.5
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.0 +0.1 -1.4 -0.2 -0.4
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.6 +0.5 -0.3 -0.2 -1.0
phage AgroPhage_C04 -1.7 -0.1 -0.1 -0.2 +0.3
carbon source D-(-)-lyxose (C) +0.2 +0.1 -2.0 +0.1 -0.0
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.4 -0.4 -0.8 -0.3 -0.3
phage AgroPhage_C10 -0.7 -0.5 +0.2 -0.6 +0.3
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.4 -0.6 -0.7 +0.1 +0.4
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.5 -0.8 +0.2 -0.3 -0.9
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.3 +0.4 +0.1 -0.5 -0.9
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.5 +0.2 -0.7 -0.2 -0.9
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.3 +0.3 -1.3 -0.1 -0.2
carbon source D-(-)-lyxose (C) +0.3 +0.1 -1.5 +0.3 -0.1
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.7 -0.4 -0.9 -0.2 +0.1
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.4 +0.7 -1.3 +0.2 +0.3
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.7 -0.2 -0.7 -0.4 +0.6
carbon source D-Leucrose (C) -0.1 +0.3 +1.4 +0.0 -0.4
nitrogen source DL-2-Aminobutyric (N) +0.5 +0.8 +0.4 +0.1 +0.3
carbon source methyl-alpha-D-xylopyranoside (C) -1.2 -1.9 +13.4 -0.2 +0.4
carbon source methyl-alpha-D-xylopyranoside (C) -1.4 -1.3 +13.7 -0.1 -0.2
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